Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 AL009183.1-201ENST00000603760 355 ntBASIC17.67■□□□□ 0.42
CLCN1P35523 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC17.67■□□□□ 0.42
CLCN1P35523 RUBCNL-201ENST00000378781 3322 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
CLCN1P35523 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLCN1P35523 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLCN1P35523 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLCN1P35523 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLCN1P35523 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
CLCN1P35523 GLB1L3-201ENST00000389887 3566 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CLCN1P35523 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLCN1P35523 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLCN1P35523 CPT1C-202ENST00000323446 2783 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLCN1P35523 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLCN1P35523 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC17.67■□□□□ 0.42
CLCN1P35523 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC17.67■□□□□ 0.42
CLCN1P35523 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC17.67■□□□□ 0.42
CLCN1P35523 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
CLCN1P35523 STRN-202ENST00000379213 2254 ntTSL 5 BASIC17.67■□□□□ 0.42
CLCN1P35523 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLCN1P35523 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLCN1P35523 MAPT-IT1-201ENST00000624111 3016 ntBASIC17.66■□□□□ 0.42
CLCN1P35523 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
CLCN1P35523 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC17.66■□□□□ 0.42
CLCN1P35523 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLCN1P35523 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC17.66■□□□□ 0.42
CLCN1P35523 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC17.66■□□□□ 0.42
CLCN1P35523 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC17.66■□□□□ 0.42
CLCN1P35523 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
CLCN1P35523 ANKRD20A19P-202ENST00000442969 2796 ntTSL 2 BASIC17.66■□□□□ 0.42
CLCN1P35523 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
CLCN1P35523 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CLCN1P35523 DLX3-201ENST00000434704 2602 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLCN1P35523 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLCN1P35523 AC092474.2-201ENST00000424288 719 ntBASIC17.66■□□□□ 0.42
CLCN1P35523 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC17.66■□□□□ 0.42
CLCN1P35523 AC090142.2-201ENST00000483263 416 ntBASIC17.66■□□□□ 0.42
CLCN1P35523 MAL2-202ENST00000531508 892 ntTSL 3 BASIC17.66■□□□□ 0.42
CLCN1P35523 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC17.66■□□□□ 0.42
CLCN1P35523 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC17.66■□□□□ 0.42
CLCN1P35523 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC17.66■□□□□ 0.42
CLCN1P35523 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC17.66■□□□□ 0.42
CLCN1P35523 AC120114.3-201ENST00000611923 658 ntBASIC17.66■□□□□ 0.42
CLCN1P35523 MED16-214ENST00000617672 554 ntTSL 5 BASIC17.66■□□□□ 0.42
CLCN1P35523 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC17.66■□□□□ 0.42
CLCN1P35523 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLCN1P35523 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLCN1P35523 DYDC2-204ENST00000372199 2254 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLCN1P35523 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLCN1P35523 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLCN1P35523 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CLCN1P35523 MYO15B-237ENST00000642007 4893 ntBASIC17.66■□□□□ 0.42
CLCN1P35523 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLCN1P35523 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLCN1P35523 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLCN1P35523 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CLCN1P35523 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC17.66■□□□□ 0.42
CLCN1P35523 DCST2-202ENST00000368424 2392 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLCN1P35523 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC17.66■□□□□ 0.42
CLCN1P35523 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
CLCN1P35523 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLCN1P35523 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC17.66■□□□□ 0.42
CLCN1P35523 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CLCN1P35523 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLCN1P35523 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLCN1P35523 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLCN1P35523 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLCN1P35523 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC17.65■□□□□ 0.42
CLCN1P35523 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC17.65■□□□□ 0.42
CLCN1P35523 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CLCN1P35523 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC17.65■□□□□ 0.42
CLCN1P35523 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC17.65■□□□□ 0.42
CLCN1P35523 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC17.65■□□□□ 0.42
CLCN1P35523 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
CLCN1P35523 TEX30-205ENST00000376029 959 ntTSL 2 BASIC17.65■□□□□ 0.42
CLCN1P35523 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC17.65■□□□□ 0.42
CLCN1P35523 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC17.65■□□□□ 0.42
CLCN1P35523 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC17.65■□□□□ 0.42
CLCN1P35523 YIPF7-202ENST00000415895 1196 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
CLCN1P35523 AC140658.5-201ENST00000438532 169 ntBASIC17.65■□□□□ 0.42
CLCN1P35523 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC17.65■□□□□ 0.42
CLCN1P35523 AC109635.5-201ENST00000533593 962 ntBASIC17.65■□□□□ 0.42
CLCN1P35523 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC17.65■□□□□ 0.42
CLCN1P35523 CD7-202ENST00000578509 925 ntTSL 3 BASIC17.65■□□□□ 0.42
CLCN1P35523 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLCN1P35523 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
CLCN1P35523 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CLCN1P35523 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLCN1P35523 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLCN1P35523 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
CLCN1P35523 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC17.65■□□□□ 0.42
CLCN1P35523 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLCN1P35523 CD300LB-202ENST00000392621 2286 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLCN1P35523 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLCN1P35523 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLCN1P35523 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
CLCN1P35523 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC17.65■□□□□ 0.42
CLCN1P35523 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC17.65■□□□□ 0.42
CLCN1P35523 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLCN1P35523 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CLCN1P35523 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 69.9 ms