Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC14.72□□□□□ -0.05
RORAP35398 BCRP6-201ENST00000510112 632 ntBASIC14.72□□□□□ -0.05
RORAP35398 BCRP7-201ENST00000511549 544 ntBASIC14.72□□□□□ -0.05
RORAP35398 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC14.72□□□□□ -0.05
RORAP35398 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC14.72□□□□□ -0.05
RORAP35398 RPL28-207ENST00000558815 616 ntTSL 2 BASIC14.72□□□□□ -0.05
RORAP35398 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC14.72□□□□□ -0.05
RORAP35398 AC107373.2-201ENST00000607735 490 ntBASIC14.72□□□□□ -0.05
RORAP35398 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
RORAP35398 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RORAP35398 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RORAP35398 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
RORAP35398 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RORAP35398 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RORAP35398 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RORAP35398 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RORAP35398 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
RORAP35398 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RORAP35398 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC14.72□□□□□ -0.05
RORAP35398 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC14.72□□□□□ -0.05
RORAP35398 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC14.72□□□□□ -0.05
RORAP35398 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
RORAP35398 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
RORAP35398 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RORAP35398 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
RORAP35398 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
RORAP35398 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RORAP35398 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
RORAP35398 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC14.71□□□□□ -0.05
RORAP35398 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
RORAP35398 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RORAP35398 POLL-217ENST00000628479 1953 ntTSL 5 BASIC14.71□□□□□ -0.05
RORAP35398 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RORAP35398 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RORAP35398 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
RORAP35398 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
RORAP35398 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
RORAP35398 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
RORAP35398 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC14.71□□□□□ -0.05
RORAP35398 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RORAP35398 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
RORAP35398 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC14.71□□□□□ -0.05
RORAP35398 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
RORAP35398 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
RORAP35398 AC092933.1-201ENST00000393644 945 ntBASIC14.71□□□□□ -0.05
RORAP35398 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
RORAP35398 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC14.71□□□□□ -0.05
RORAP35398 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC14.71□□□□□ -0.05
RORAP35398 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC14.71□□□□□ -0.05
RORAP35398 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
RORAP35398 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC14.71□□□□□ -0.05
RORAP35398 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC14.71□□□□□ -0.05
RORAP35398 UBL5-208ENST00000593087 320 ntTSL 3 BASIC14.71□□□□□ -0.05
RORAP35398 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RORAP35398 ATF5-205ENST00000600336 682 ntTSL 2 BASIC14.71□□□□□ -0.05
RORAP35398 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC14.71□□□□□ -0.05
RORAP35398 RPS24-214ENST00000613865 538 ntTSL 5 BASIC14.71□□□□□ -0.05
RORAP35398 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
RORAP35398 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
RORAP35398 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
RORAP35398 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC14.71□□□□□ -0.05
RORAP35398 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
RORAP35398 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
RORAP35398 MSTO2P-201ENST00000314835 1709 ntBASIC14.71□□□□□ -0.05
RORAP35398 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RORAP35398 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
RORAP35398 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC14.71□□□□□ -0.05
RORAP35398 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC14.71□□□□□ -0.05
RORAP35398 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
RORAP35398 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
RORAP35398 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
RORAP35398 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
RORAP35398 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.06
RORAP35398 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC14.71□□□□□ -0.06
RORAP35398 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.06
RORAP35398 TCAF2P1-201ENST00000291129 2421 ntBASIC14.71□□□□□ -0.06
RORAP35398 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.06
RORAP35398 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RORAP35398 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC14.7□□□□□ -0.06
RORAP35398 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
RORAP35398 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
RORAP35398 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RORAP35398 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
RORAP35398 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
RORAP35398 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
RORAP35398 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RORAP35398 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
RORAP35398 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RORAP35398 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RORAP35398 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC14.7□□□□□ -0.06
RORAP35398 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
RORAP35398 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
RORAP35398 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC14.7□□□□□ -0.06
RORAP35398 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
RORAP35398 ACKR1-201ENST00000368121 1240 ntBASIC14.7□□□□□ -0.06
RORAP35398 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC14.7□□□□□ -0.06
RORAP35398 AL355864.2-201ENST00000447420 863 ntBASIC14.7□□□□□ -0.06
RORAP35398 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC14.7□□□□□ -0.06
RORAP35398 CTBP2P5-201ENST00000454986 1264 ntBASIC14.7□□□□□ -0.06
RORAP35398 MDH2-205ENST00000461263 648 ntTSL 2 BASIC14.7□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms