Protein–RNA interactions for Protein: P28329

CHAT, Choline O-acetyltransferase, humanhuman

Predictions only

Length 748 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHATP28329 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CHATP28329 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CHATP28329 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CHATP28329 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CHATP28329 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
CHATP28329 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
CHATP28329 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CHATP28329 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
CHATP28329 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CHATP28329 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC13.27□□□□□ -0.29
CHATP28329 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC13.27□□□□□ -0.29
CHATP28329 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
CHATP28329 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
CHATP28329 AL390755.1-201ENST00000623716 2027 ntBASIC13.27□□□□□ -0.29
CHATP28329 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
CHATP28329 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC13.27□□□□□ -0.29
CHATP28329 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
CHATP28329 FGD5P1-202ENST00000614866 2498 ntBASIC13.27□□□□□ -0.29
CHATP28329 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC13.26□□□□□ -0.29
CHATP28329 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CHATP28329 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
CHATP28329 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC13.26□□□□□ -0.29
CHATP28329 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
CHATP28329 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CHATP28329 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CHATP28329 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CHATP28329 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CHATP28329 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
CHATP28329 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CHATP28329 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
CHATP28329 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
CHATP28329 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CHATP28329 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
CHATP28329 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CHATP28329 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
CHATP28329 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
CHATP28329 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CHATP28329 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC13.26□□□□□ -0.29
CHATP28329 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
CHATP28329 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
CHATP28329 YBX2P1-201ENST00000394192 760 ntBASIC13.26□□□□□ -0.29
CHATP28329 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CHATP28329 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC13.26□□□□□ -0.29
CHATP28329 MIR940-201ENST00000401276 94 ntBASIC13.26□□□□□ -0.29
CHATP28329 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC13.26□□□□□ -0.29
CHATP28329 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC13.26□□□□□ -0.29
CHATP28329 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC13.26□□□□□ -0.29
CHATP28329 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CHATP28329 ACTG1P14-201ENST00000446382 1122 ntBASIC13.26□□□□□ -0.29
CHATP28329 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC13.26□□□□□ -0.29
CHATP28329 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC13.26□□□□□ -0.29
CHATP28329 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
CHATP28329 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC13.26□□□□□ -0.29
CHATP28329 AC069335.1-201ENST00000489972 472 ntBASIC13.26□□□□□ -0.29
CHATP28329 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC13.26□□□□□ -0.29
CHATP28329 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CHATP28329 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CHATP28329 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC13.26□□□□□ -0.29
CHATP28329 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC13.26□□□□□ -0.29
CHATP28329 SUOX-214ENST00000551841 906 ntTSL 3 BASIC13.26□□□□□ -0.29
CHATP28329 RARRES2P9-201ENST00000565168 469 ntBASIC13.26□□□□□ -0.29
CHATP28329 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC13.26□□□□□ -0.29
CHATP28329 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CHATP28329 UXT-AS1-201ENST00000590504 1525 ntBASIC13.26□□□□□ -0.29
CHATP28329 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CHATP28329 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC13.26□□□□□ -0.29
CHATP28329 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CHATP28329 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC13.26□□□□□ -0.29
CHATP28329 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CHATP28329 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
CHATP28329 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
CHATP28329 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CHATP28329 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
CHATP28329 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC13.26□□□□□ -0.29
CHATP28329 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CHATP28329 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
CHATP28329 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC13.26□□□□□ -0.29
CHATP28329 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
CHATP28329 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
CHATP28329 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
CHATP28329 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CHATP28329 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CHATP28329 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
CHATP28329 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CHATP28329 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
CHATP28329 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC13.25□□□□□ -0.29
CHATP28329 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC13.25□□□□□ -0.29
CHATP28329 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC13.25□□□□□ -0.29
CHATP28329 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CHATP28329 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CHATP28329 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CHATP28329 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CHATP28329 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CHATP28329 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
CHATP28329 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
CHATP28329 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
CHATP28329 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
CHATP28329 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CHATP28329 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
CHATP28329 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms