Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC11.96□□□□□ -0.5
RAB4AP20338 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
RAB4AP20338 EHMT2-204ENST00000395728 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
RAB4AP20338 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
RAB4AP20338 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
RAB4AP20338 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC11.95□□□□□ -0.5
RAB4AP20338 AL805961.2-201ENST00000642139 4817 ntBASIC11.95□□□□□ -0.5
RAB4AP20338 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC11.95□□□□□ -0.5
RAB4AP20338 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
RAB4AP20338 CD74-202ENST00000353334 1449 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
RAB4AP20338 NUMA1-234ENST00000620566 7012 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
RAB4AP20338 MBNL1-AS1-202ENST00000608395 6585 ntTSL 2 BASIC11.95□□□□□ -0.5
RAB4AP20338 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
RAB4AP20338 ADAMTS9-210ENST00000498707 7624 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
RAB4AP20338 C10orf105-202ENST00000441508 4836 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
RAB4AP20338 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
RAB4AP20338 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
RAB4AP20338 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC11.95□□□□□ -0.5
RAB4AP20338 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC11.95□□□□□ -0.5
RAB4AP20338 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
RAB4AP20338 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
RAB4AP20338 COX5A-202ENST00000562233 441 ntTSL 3 BASIC11.95□□□□□ -0.5
RAB4AP20338 COX5A-204ENST00000567270 579 ntTSL 3 BASIC11.95□□□□□ -0.5
RAB4AP20338 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC11.95□□□□□ -0.5
RAB4AP20338 COPE-211ENST00000600932 1144 ntTSL 5 BASIC11.95□□□□□ -0.5
RAB4AP20338 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
RAB4AP20338 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC11.95□□□□□ -0.5
RAB4AP20338 AP000867.4-201ENST00000641616 219 ntBASIC11.95□□□□□ -0.5
RAB4AP20338 TNRC6C-211ENST00000636222 7093 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
RAB4AP20338 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC11.95□□□□□ -0.5
RAB4AP20338 AC241585.2-201ENST00000578899 2307 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
RAB4AP20338 TRPM2-203ENST00000397928 6221 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
RAB4AP20338 FAM120B-205ENST00000630384 3721 ntAPPRIS ALT2 TSL 2 BASIC11.95□□□□□ -0.5
RAB4AP20338 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
RAB4AP20338 INTS4P1-201ENST00000438455 1935 ntBASIC11.95□□□□□ -0.5
RAB4AP20338 CAMKV-209ENST00000477224 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
RAB4AP20338 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
RAB4AP20338 AHI1-201ENST00000265602 4335 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
RAB4AP20338 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC11.95□□□□□ -0.5
RAB4AP20338 DHX38-201ENST00000268482 4608 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
RAB4AP20338 RAPGEF4-AS1-202ENST00000435328 4625 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
RAB4AP20338 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
RAB4AP20338 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC11.95□□□□□ -0.5
RAB4AP20338 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC11.95□□□□□ -0.5
RAB4AP20338 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC11.95□□□□□ -0.5
RAB4AP20338 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC11.95□□□□□ -0.5
RAB4AP20338 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
RAB4AP20338 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC11.95□□□□□ -0.5
RAB4AP20338 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC11.95□□□□□ -0.5
RAB4AP20338 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
RAB4AP20338 C15orf40-201ENST00000304177 11244 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
RAB4AP20338 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC11.95□□□□□ -0.5
RAB4AP20338 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC11.95□□□□□ -0.5
RAB4AP20338 SIGLEC16-201ENST00000599858 1437 ntBASIC11.94□□□□□ -0.5
RAB4AP20338 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
RAB4AP20338 RTL10-201ENST00000328554 6619 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
RAB4AP20338 EPM2AIP1-201ENST00000322716 8126 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
RAB4AP20338 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
RAB4AP20338 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC11.94□□□□□ -0.5
RAB4AP20338 GID4-202ENST00000376345 1391 ntTSL 3 BASIC11.94□□□□□ -0.5
RAB4AP20338 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
RAB4AP20338 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
RAB4AP20338 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC11.94□□□□□ -0.5
RAB4AP20338 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
RAB4AP20338 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC11.94□□□□□ -0.5
RAB4AP20338 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
RAB4AP20338 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC11.94□□□□□ -0.5
RAB4AP20338 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
RAB4AP20338 ST6GAL2-201ENST00000361686 6857 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
RAB4AP20338 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC11.94□□□□□ -0.5
RAB4AP20338 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
RAB4AP20338 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
RAB4AP20338 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
RAB4AP20338 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
RAB4AP20338 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
RAB4AP20338 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC11.94□□□□□ -0.5
RAB4AP20338 RNF152P1-201ENST00000397754 604 ntBASIC11.94□□□□□ -0.5
RAB4AP20338 AL645929.1-201ENST00000420084 975 ntBASIC11.94□□□□□ -0.5
RAB4AP20338 WDR53-204ENST00000433160 887 ntTSL 5 BASIC11.94□□□□□ -0.5
RAB4AP20338 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC11.94□□□□□ -0.5
RAB4AP20338 AC091607.1-201ENST00000490318 1060 ntBASIC11.94□□□□□ -0.5
RAB4AP20338 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC11.94□□□□□ -0.5
RAB4AP20338 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC11.94□□□□□ -0.5
RAB4AP20338 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC11.94□□□□□ -0.5
RAB4AP20338 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC11.94□□□□□ -0.5
RAB4AP20338 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC11.94□□□□□ -0.5
RAB4AP20338 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC11.94□□□□□ -0.5
RAB4AP20338 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC11.94□□□□□ -0.5
RAB4AP20338 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
RAB4AP20338 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
RAB4AP20338 KIAA1614-202ENST00000367588 9654 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
RAB4AP20338 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
RAB4AP20338 AL592424.1-201ENST00000563624 1536 ntBASIC11.94□□□□□ -0.5
RAB4AP20338 BIRC5-202ENST00000350051 2630 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
RAB4AP20338 INF2-202ENST00000330634 7578 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
RAB4AP20338 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC11.94□□□□□ -0.5
RAB4AP20338 LRRC15-201ENST00000347624 5883 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
RAB4AP20338 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
RAB4AP20338 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
RAB4AP20338 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC11.94□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 69.5 ms