Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC14.42□□□□□ -0.1
TNFRSF1BP20333 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TNFRSF1BP20333 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TNFRSF1BP20333 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
TNFRSF1BP20333 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TNFRSF1BP20333 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TNFRSF1BP20333 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TNFRSF1BP20333 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC14.42□□□□□ -0.1
TNFRSF1BP20333 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TNFRSF1BP20333 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TNFRSF1BP20333 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC14.42□□□□□ -0.1
TNFRSF1BP20333 MIR574-201ENST00000385209 96 ntBASIC14.42□□□□□ -0.1
TNFRSF1BP20333 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC14.42□□□□□ -0.1
TNFRSF1BP20333 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TNFRSF1BP20333 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC14.42□□□□□ -0.1
TNFRSF1BP20333 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC14.42□□□□□ -0.1
TNFRSF1BP20333 AC026396.1-201ENST00000419388 421 ntBASIC14.42□□□□□ -0.1
TNFRSF1BP20333 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC14.42□□□□□ -0.1
TNFRSF1BP20333 MKNK2P1-201ENST00000437526 628 ntBASIC14.42□□□□□ -0.1
TNFRSF1BP20333 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TNFRSF1BP20333 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC14.42□□□□□ -0.1
TNFRSF1BP20333 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
TNFRSF1BP20333 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC14.42□□□□□ -0.1
TNFRSF1BP20333 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC14.42□□□□□ -0.1
TNFRSF1BP20333 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC14.42□□□□□ -0.1
TNFRSF1BP20333 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC14.42□□□□□ -0.1
TNFRSF1BP20333 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
TNFRSF1BP20333 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC14.42□□□□□ -0.1
TNFRSF1BP20333 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TNFRSF1BP20333 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TNFRSF1BP20333 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC14.42□□□□□ -0.1
TNFRSF1BP20333 MTHFR-210ENST00000641407 2387 ntBASIC14.42□□□□□ -0.1
TNFRSF1BP20333 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TNFRSF1BP20333 ELL2P1-201ENST00000413990 1906 ntBASIC14.42□□□□□ -0.1
TNFRSF1BP20333 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
TNFRSF1BP20333 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC14.42□□□□□ -0.1
TNFRSF1BP20333 WASH3P-207ENST00000560956 1394 ntBASIC14.42□□□□□ -0.1
TNFRSF1BP20333 FO538757.1-201ENST00000623083 1397 ntBASIC14.42□□□□□ -0.1
TNFRSF1BP20333 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC14.42□□□□□ -0.1
TNFRSF1BP20333 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
TNFRSF1BP20333 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC14.42□□□□□ -0.1
TNFRSF1BP20333 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TNFRSF1BP20333 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TNFRSF1BP20333 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TNFRSF1BP20333 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TNFRSF1BP20333 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC14.42□□□□□ -0.1
TNFRSF1BP20333 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
TNFRSF1BP20333 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
TNFRSF1BP20333 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
TNFRSF1BP20333 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
TNFRSF1BP20333 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
TNFRSF1BP20333 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TNFRSF1BP20333 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC14.41□□□□□ -0.1
TNFRSF1BP20333 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TNFRSF1BP20333 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
TNFRSF1BP20333 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TNFRSF1BP20333 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TNFRSF1BP20333 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC14.41□□□□□ -0.1
TNFRSF1BP20333 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
TNFRSF1BP20333 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TNFRSF1BP20333 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC14.41□□□□□ -0.1
TNFRSF1BP20333 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
TNFRSF1BP20333 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TNFRSF1BP20333 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
TNFRSF1BP20333 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TNFRSF1BP20333 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
TNFRSF1BP20333 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TNFRSF1BP20333 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TNFRSF1BP20333 RPL5P21-201ENST00000404620 815 ntBASIC14.41□□□□□ -0.1
TNFRSF1BP20333 AC074338.1-201ENST00000416825 156 ntBASIC14.41□□□□□ -0.1
TNFRSF1BP20333 MTND6P24-201ENST00000440466 518 ntBASIC14.41□□□□□ -0.1
TNFRSF1BP20333 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC14.41□□□□□ -0.1
TNFRSF1BP20333 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TNFRSF1BP20333 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC14.41□□□□□ -0.1
TNFRSF1BP20333 KRT18P58-201ENST00000527480 1120 ntBASIC14.41□□□□□ -0.1
TNFRSF1BP20333 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC14.41□□□□□ -0.1
TNFRSF1BP20333 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
TNFRSF1BP20333 TSFM-210ENST00000550559 897 ntTSL 5 BASIC14.41□□□□□ -0.1
TNFRSF1BP20333 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC14.41□□□□□ -0.1
TNFRSF1BP20333 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC14.41□□□□□ -0.1
TNFRSF1BP20333 AL133215.2-201ENST00000609242 977 ntBASIC14.41□□□□□ -0.1
TNFRSF1BP20333 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
TNFRSF1BP20333 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TNFRSF1BP20333 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TNFRSF1BP20333 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
TNFRSF1BP20333 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TNFRSF1BP20333 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TNFRSF1BP20333 AC097359.2-201ENST00000604992 2389 ntBASIC14.41□□□□□ -0.1
TNFRSF1BP20333 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TNFRSF1BP20333 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC14.41□□□□□ -0.1
TNFRSF1BP20333 ABR-228ENST00000574437 3196 ntTSL 5 BASIC14.41□□□□□ -0.1
TNFRSF1BP20333 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TNFRSF1BP20333 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TNFRSF1BP20333 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC14.41□□□□□ -0.1
TNFRSF1BP20333 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC14.41□□□□□ -0.1
TNFRSF1BP20333 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC14.41□□□□□ -0.1
TNFRSF1BP20333 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
TNFRSF1BP20333 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
TNFRSF1BP20333 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
TNFRSF1BP20333 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 10.6 ms