Protein–RNA interactions for Protein: P15884

TCF4, Transcription factor 4, humanhuman

Predictions only

Length 667 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4P15884 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TCF4P15884 LINC00552-201ENST00000625151 2579 ntBASIC16.12■□□□□ 0.17
TCF4P15884 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TCF4P15884 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
TCF4P15884 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TCF4P15884 BTBD7P1-201ENST00000447253 1453 ntBASIC16.12■□□□□ 0.17
TCF4P15884 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.12■□□□□ 0.17
TCF4P15884 VMA21-202ENST00000370361 693 ntTSL 5 BASIC16.12■□□□□ 0.17
TCF4P15884 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC16.12■□□□□ 0.17
TCF4P15884 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC16.12■□□□□ 0.17
TCF4P15884 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC16.12■□□□□ 0.17
TCF4P15884 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC16.12■□□□□ 0.17
TCF4P15884 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC16.12■□□□□ 0.17
TCF4P15884 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC16.12■□□□□ 0.17
TCF4P15884 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC16.12■□□□□ 0.17
TCF4P15884 TIMM17BP1-201ENST00000545713 516 ntBASIC16.12■□□□□ 0.17
TCF4P15884 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC16.12■□□□□ 0.17
TCF4P15884 DUT-210ENST00000559935 569 ntTSL 3 BASIC16.12■□□□□ 0.17
TCF4P15884 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TCF4P15884 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
TCF4P15884 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TCF4P15884 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
TCF4P15884 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
TCF4P15884 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TCF4P15884 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC16.12■□□□□ 0.17
TCF4P15884 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
TCF4P15884 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
TCF4P15884 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
TCF4P15884 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TCF4P15884 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
TCF4P15884 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TCF4P15884 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC16.12■□□□□ 0.17
TCF4P15884 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
TCF4P15884 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TCF4P15884 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TCF4P15884 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
TCF4P15884 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
TCF4P15884 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
TCF4P15884 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC16.12■□□□□ 0.17
TCF4P15884 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TCF4P15884 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TCF4P15884 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TCF4P15884 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TCF4P15884 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TCF4P15884 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC16.11■□□□□ 0.17
TCF4P15884 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TCF4P15884 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TCF4P15884 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC16.11■□□□□ 0.17
TCF4P15884 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
TCF4P15884 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TCF4P15884 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TCF4P15884 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TCF4P15884 AC104457.1-201ENST00000401024 814 ntBASIC16.11■□□□□ 0.17
TCF4P15884 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC16.11■□□□□ 0.17
TCF4P15884 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TCF4P15884 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC16.11■□□□□ 0.17
TCF4P15884 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
TCF4P15884 GNAQP1-201ENST00000444815 1067 ntBASIC16.11■□□□□ 0.17
TCF4P15884 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC16.11■□□□□ 0.17
TCF4P15884 MEIS3P1-201ENST00000495167 958 ntBASIC16.11■□□□□ 0.17
TCF4P15884 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TCF4P15884 AC023310.3-201ENST00000557027 670 ntBASIC16.11■□□□□ 0.17
TCF4P15884 AC100756.1-201ENST00000562736 682 ntBASIC16.11■□□□□ 0.17
TCF4P15884 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TCF4P15884 AC138749.3-201ENST00000567691 622 ntBASIC16.11■□□□□ 0.17
TCF4P15884 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC16.11■□□□□ 0.17
TCF4P15884 AC116165.1-201ENST00000611806 668 ntBASIC16.11■□□□□ 0.17
TCF4P15884 ORC5-208ENST00000626700 344 ntTSL 3 BASIC16.11■□□□□ 0.17
TCF4P15884 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
TCF4P15884 USP35-204ENST00000530267 2419 ntTSL 2 BASIC16.11■□□□□ 0.17
TCF4P15884 AC023908.3-201ENST00000564211 3047 ntBASIC16.11■□□□□ 0.17
TCF4P15884 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC16.11■□□□□ 0.17
TCF4P15884 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
TCF4P15884 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
TCF4P15884 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TCF4P15884 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TCF4P15884 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TCF4P15884 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TCF4P15884 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TCF4P15884 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
TCF4P15884 WASH3P-207ENST00000560956 1394 ntBASIC16.11■□□□□ 0.17
TCF4P15884 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TCF4P15884 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TCF4P15884 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TCF4P15884 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
TCF4P15884 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC16.1■□□□□ 0.17
TCF4P15884 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TCF4P15884 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
TCF4P15884 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC16.1■□□□□ 0.17
TCF4P15884 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TCF4P15884 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TCF4P15884 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TCF4P15884 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
TCF4P15884 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TCF4P15884 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC16.1■□□□□ 0.17
TCF4P15884 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
TCF4P15884 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
TCF4P15884 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
TCF4P15884 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TCF4P15884 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms