Protein–RNA interactions for Protein: P11836

MS4A1, B-lymphocyte antigen CD20, humanhuman

Predictions only

Length 297 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A1P11836 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
MS4A1P11836 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
MS4A1P11836 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC19.9■□□□□ 0.78
MS4A1P11836 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
MS4A1P11836 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
MS4A1P11836 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
MS4A1P11836 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC19.9■□□□□ 0.78
MS4A1P11836 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
MS4A1P11836 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
MS4A1P11836 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
MS4A1P11836 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
MS4A1P11836 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
MS4A1P11836 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.78
MS4A1P11836 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC19.89■□□□□ 0.78
MS4A1P11836 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
MS4A1P11836 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
MS4A1P11836 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.78
MS4A1P11836 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
MS4A1P11836 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
MS4A1P11836 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
MS4A1P11836 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC19.89■□□□□ 0.77
MS4A1P11836 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
MS4A1P11836 POLL-206ENST00000370172 2308 ntTSL 2 BASIC19.89■□□□□ 0.77
MS4A1P11836 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
MS4A1P11836 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
MS4A1P11836 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
MS4A1P11836 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
MS4A1P11836 CYP2AB1P-202ENST00000454440 1456 ntBASIC19.89■□□□□ 0.77
MS4A1P11836 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
MS4A1P11836 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
MS4A1P11836 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC19.89■□□□□ 0.77
MS4A1P11836 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
MS4A1P11836 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
MS4A1P11836 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC19.89■□□□□ 0.77
MS4A1P11836 WASH3P-207ENST00000560956 1394 ntBASIC19.89■□□□□ 0.77
MS4A1P11836 MPI-209ENST00000564003 1195 ntTSL 2 BASIC19.89■□□□□ 0.77
MS4A1P11836 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
MS4A1P11836 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
MS4A1P11836 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC19.89■□□□□ 0.77
MS4A1P11836 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC19.89■□□□□ 0.77
MS4A1P11836 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
MS4A1P11836 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
MS4A1P11836 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
MS4A1P11836 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
MS4A1P11836 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
MS4A1P11836 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
MS4A1P11836 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
MS4A1P11836 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC19.88■□□□□ 0.77
MS4A1P11836 MFF-204ENST00000353339 2186 ntTSL 5 BASIC19.88■□□□□ 0.77
MS4A1P11836 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
MS4A1P11836 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC19.88■□□□□ 0.77
MS4A1P11836 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC19.88■□□□□ 0.77
MS4A1P11836 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
MS4A1P11836 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC19.88■□□□□ 0.77
MS4A1P11836 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
MS4A1P11836 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
MS4A1P11836 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
MS4A1P11836 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
MS4A1P11836 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
MS4A1P11836 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
MS4A1P11836 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
MS4A1P11836 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
MS4A1P11836 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
MS4A1P11836 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
MS4A1P11836 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
MS4A1P11836 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
MS4A1P11836 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC19.88■□□□□ 0.77
MS4A1P11836 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
MS4A1P11836 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
MS4A1P11836 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
MS4A1P11836 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC19.88■□□□□ 0.77
MS4A1P11836 KRT18P43-201ENST00000469825 1281 ntBASIC19.88■□□□□ 0.77
MS4A1P11836 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC19.88■□□□□ 0.77
MS4A1P11836 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC19.88■□□□□ 0.77
MS4A1P11836 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC19.88■□□□□ 0.77
MS4A1P11836 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
MS4A1P11836 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
MS4A1P11836 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
MS4A1P11836 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC19.88■□□□□ 0.77
MS4A1P11836 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
MS4A1P11836 ZBED1P1-201ENST00000502364 1930 ntBASIC19.88■□□□□ 0.77
MS4A1P11836 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
MS4A1P11836 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
MS4A1P11836 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
MS4A1P11836 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
MS4A1P11836 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
MS4A1P11836 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
MS4A1P11836 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
MS4A1P11836 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
MS4A1P11836 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
MS4A1P11836 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
MS4A1P11836 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
MS4A1P11836 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
MS4A1P11836 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
MS4A1P11836 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
MS4A1P11836 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
MS4A1P11836 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
MS4A1P11836 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC19.87■□□□□ 0.77
MS4A1P11836 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC19.87■□□□□ 0.77
MS4A1P11836 KRT18P64-201ENST00000434946 1219 ntBASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms