Protein–RNA interactions for Protein: P0DMS9

TMIGD3, Transmembrane domain-containing protein TMIGD3, humanhuman

Predicted RBP Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMIGD3P0DMS9 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
TMIGD3P0DMS9 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC14.06□□□□□ -0.16
TMIGD3P0DMS9 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC14.06□□□□□ -0.16
TMIGD3P0DMS9 NME4-207ENST00000450036 985 ntTSL 3 BASIC14.06□□□□□ -0.16
TMIGD3P0DMS9 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC14.06□□□□□ -0.16
TMIGD3P0DMS9 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC14.06□□□□□ -0.16
TMIGD3P0DMS9 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC14.06□□□□□ -0.16
TMIGD3P0DMS9 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC14.06□□□□□ -0.16
TMIGD3P0DMS9 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TMIGD3P0DMS9 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC14.06□□□□□ -0.16
TMIGD3P0DMS9 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC14.06□□□□□ -0.16
TMIGD3P0DMS9 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC14.06□□□□□ -0.16
TMIGD3P0DMS9 AL158212.4-201ENST00000624062 1286 ntBASIC14.06□□□□□ -0.16
TMIGD3P0DMS9 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC14.06□□□□□ -0.16
TMIGD3P0DMS9 API5-202ENST00000420461 2009 ntTSL 2 BASIC14.06□□□□□ -0.16
TMIGD3P0DMS9 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
TMIGD3P0DMS9 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
TMIGD3P0DMS9 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
TMIGD3P0DMS9 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
TMIGD3P0DMS9 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TMIGD3P0DMS9 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
TMIGD3P0DMS9 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC14.06□□□□□ -0.16
TMIGD3P0DMS9 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TMIGD3P0DMS9 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TMIGD3P0DMS9 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC14.06□□□□□ -0.16
TMIGD3P0DMS9 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TMIGD3P0DMS9 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC14.06□□□□□ -0.16
TMIGD3P0DMS9 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
TMIGD3P0DMS9 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC14.06□□□□□ -0.16
TMIGD3P0DMS9 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TMIGD3P0DMS9 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
TMIGD3P0DMS9 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TMIGD3P0DMS9 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TMIGD3P0DMS9 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
TMIGD3P0DMS9 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TMIGD3P0DMS9 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TMIGD3P0DMS9 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TMIGD3P0DMS9 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TMIGD3P0DMS9 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TMIGD3P0DMS9 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC14.05□□□□□ -0.16
TMIGD3P0DMS9 TMBIM7P-203ENST00000641617 1718 ntBASIC14.05□□□□□ -0.16
TMIGD3P0DMS9 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
TMIGD3P0DMS9 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TMIGD3P0DMS9 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
TMIGD3P0DMS9 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC14.05□□□□□ -0.16
TMIGD3P0DMS9 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
TMIGD3P0DMS9 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TMIGD3P0DMS9 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC14.05□□□□□ -0.16
TMIGD3P0DMS9 U91328.1-201ENST00000437528 223 ntBASIC14.05□□□□□ -0.16
TMIGD3P0DMS9 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC14.05□□□□□ -0.16
TMIGD3P0DMS9 TTTY23B-201ENST00000442790 549 ntBASIC14.05□□□□□ -0.16
TMIGD3P0DMS9 USP40-206ENST00000443711 628 ntTSL 2 BASIC14.05□□□□□ -0.16
TMIGD3P0DMS9 RN7SL837P-201ENST00000463010 287 ntBASIC14.05□□□□□ -0.16
TMIGD3P0DMS9 RN7SL399P-201ENST00000471648 279 ntBASIC14.05□□□□□ -0.16
TMIGD3P0DMS9 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
TMIGD3P0DMS9 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC14.05□□□□□ -0.16
TMIGD3P0DMS9 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC14.05□□□□□ -0.16
TMIGD3P0DMS9 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC14.05□□□□□ -0.16
TMIGD3P0DMS9 AL008721.1-201ENST00000609964 604 ntBASIC14.05□□□□□ -0.16
TMIGD3P0DMS9 WFDC1-204ENST00000613603 549 ntBASIC14.05□□□□□ -0.16
TMIGD3P0DMS9 MIR8072-201ENST00000614241 80 ntBASIC14.05□□□□□ -0.16
TMIGD3P0DMS9 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC14.05□□□□□ -0.16
TMIGD3P0DMS9 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC14.05□□□□□ -0.16
TMIGD3P0DMS9 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TMIGD3P0DMS9 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TMIGD3P0DMS9 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
TMIGD3P0DMS9 MECR-202ENST00000373791 2416 ntTSL 2 BASIC14.05□□□□□ -0.16
TMIGD3P0DMS9 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TMIGD3P0DMS9 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TMIGD3P0DMS9 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TMIGD3P0DMS9 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
TMIGD3P0DMS9 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TMIGD3P0DMS9 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
TMIGD3P0DMS9 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC14.05□□□□□ -0.16
TMIGD3P0DMS9 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
TMIGD3P0DMS9 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC14.05□□□□□ -0.16
TMIGD3P0DMS9 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
TMIGD3P0DMS9 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TMIGD3P0DMS9 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TMIGD3P0DMS9 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TMIGD3P0DMS9 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC14.04□□□□□ -0.16
TMIGD3P0DMS9 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TMIGD3P0DMS9 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC14.04□□□□□ -0.16
TMIGD3P0DMS9 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TMIGD3P0DMS9 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC14.04□□□□□ -0.16
TMIGD3P0DMS9 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TMIGD3P0DMS9 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC14.04□□□□□ -0.16
TMIGD3P0DMS9 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TMIGD3P0DMS9 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TMIGD3P0DMS9 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
TMIGD3P0DMS9 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TMIGD3P0DMS9 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
TMIGD3P0DMS9 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
TMIGD3P0DMS9 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
TMIGD3P0DMS9 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
TMIGD3P0DMS9 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
TMIGD3P0DMS9 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
TMIGD3P0DMS9 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC14.04□□□□□ -0.16
TMIGD3P0DMS9 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
TMIGD3P0DMS9 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC14.04□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 92.7 ms