Protein–RNA interactions for Protein: P0DI80

SMIM6, Small integral membrane protein 6, humanhuman

Predictions only

Length 62 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM6P0DI80 FOS-202ENST00000535987 1402 ntTSL 2 BASIC11.5□□□□□ -0.57
SMIM6P0DI80 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
SMIM6P0DI80 DLGAP2-201ENST00000421627 3165 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
SMIM6P0DI80 SLC28A1-201ENST00000286749 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
SMIM6P0DI80 USP6NL-205ENST00000609104 11377 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
SMIM6P0DI80 GNB5-203ENST00000396335 2678 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
SMIM6P0DI80 COBLL1-225ENST00000629362 3868 ntAPPRIS ALT2 TSL 2 BASIC11.5□□□□□ -0.57
SMIM6P0DI80 JAM3-201ENST00000299106 3912 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
SMIM6P0DI80 HPSE2-202ENST00000370549 2121 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
SMIM6P0DI80 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
SMIM6P0DI80 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC11.5□□□□□ -0.57
SMIM6P0DI80 C9orf47-203ENST00000375851 4837 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
SMIM6P0DI80 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
SMIM6P0DI80 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC11.49□□□□□ -0.57
SMIM6P0DI80 AC239809.3-201ENST00000599640 4266 ntTSL 5 BASIC11.49□□□□□ -0.57
SMIM6P0DI80 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
SMIM6P0DI80 ZNF426-204ENST00000593003 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
SMIM6P0DI80 WDR81-205ENST00000437219 3184 ntTSL 2 BASIC11.49□□□□□ -0.57
SMIM6P0DI80 WDR27-203ENST00000448612 3178 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
SMIM6P0DI80 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
SMIM6P0DI80 ST3GAL1-211ENST00000522652 2580 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SMIM6P0DI80 GLT8D2-201ENST00000360814 1880 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SMIM6P0DI80 SLC44A4-210ENST00000544672 2634 ntTSL 2 BASIC11.49□□□□□ -0.57
SMIM6P0DI80 SLA2-201ENST00000262866 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SMIM6P0DI80 IFNLR1-201ENST00000327535 4549 ntAPPRIS P4 TSL 1 (best) BASIC11.49□□□□□ -0.57
SMIM6P0DI80 VHL-201ENST00000256474 3737 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SMIM6P0DI80 CACNA2D3-AS1-201ENST00000471265 2078 ntTSL 2 BASIC11.49□□□□□ -0.57
SMIM6P0DI80 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SMIM6P0DI80 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC11.49□□□□□ -0.57
SMIM6P0DI80 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC11.49□□□□□ -0.57
SMIM6P0DI80 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC11.49□□□□□ -0.57
SMIM6P0DI80 KRT18P29-201ENST00000397031 1267 ntBASIC11.49□□□□□ -0.57
SMIM6P0DI80 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SMIM6P0DI80 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC11.49□□□□□ -0.57
SMIM6P0DI80 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SMIM6P0DI80 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC11.49□□□□□ -0.57
SMIM6P0DI80 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC11.49□□□□□ -0.57
SMIM6P0DI80 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC11.49□□□□□ -0.57
SMIM6P0DI80 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
SMIM6P0DI80 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SMIM6P0DI80 AC022447.6-201ENST00000515522 438 ntBASIC11.49□□□□□ -0.57
SMIM6P0DI80 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC11.49□□□□□ -0.57
SMIM6P0DI80 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC11.49□□□□□ -0.57
SMIM6P0DI80 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC11.49□□□□□ -0.57
SMIM6P0DI80 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
SMIM6P0DI80 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
SMIM6P0DI80 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC11.49□□□□□ -0.57
SMIM6P0DI80 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC11.49□□□□□ -0.57
SMIM6P0DI80 PCDHGA12-201ENST00000252085 4747 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
SMIM6P0DI80 OSBPL2-203ENST00000439951 3886 ntTSL 5 BASIC11.49□□□□□ -0.57
SMIM6P0DI80 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC11.49□□□□□ -0.57
SMIM6P0DI80 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC11.49□□□□□ -0.57
SMIM6P0DI80 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC11.49□□□□□ -0.57
SMIM6P0DI80 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
SMIM6P0DI80 MTMR11-201ENST00000369140 2324 ntAPPRIS ALT2 TSL 2 BASIC11.49□□□□□ -0.57
SMIM6P0DI80 PRKAG3-203ENST00000439262 2301 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SMIM6P0DI80 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SMIM6P0DI80 ICOSLG-203ENST00000400379 4246 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
SMIM6P0DI80 COL6A2-204ENST00000409416 3430 ntTSL 5 BASIC11.49□□□□□ -0.57
SMIM6P0DI80 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SMIM6P0DI80 AC018892.3-201ENST00000623986 2499 ntBASIC11.49□□□□□ -0.57
SMIM6P0DI80 ARPIN-201ENST00000357484 7591 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SMIM6P0DI80 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC11.49□□□□□ -0.57
SMIM6P0DI80 GUCY2D-201ENST00000254854 3698 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SMIM6P0DI80 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SMIM6P0DI80 AP3S2-216ENST00000617003 1561 ntBASIC11.49□□□□□ -0.57
SMIM6P0DI80 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
SMIM6P0DI80 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SMIM6P0DI80 ZNF595-205ENST00000610261 2911 ntAPPRIS P4 TSL 1 (best) BASIC11.49□□□□□ -0.57
SMIM6P0DI80 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SMIM6P0DI80 XRCC3-202ENST00000553264 3018 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
SMIM6P0DI80 ALOXE3-201ENST00000318227 3053 ntTSL 2 BASIC11.49□□□□□ -0.57
SMIM6P0DI80 SEPT10-202ENST00000397712 3071 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
SMIM6P0DI80 RSPO2-201ENST00000276659 3111 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
SMIM6P0DI80 GOLGA6L2-202ENST00000345070 1972 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
SMIM6P0DI80 CACNA1G-214ENST00000505165 6633 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
SMIM6P0DI80 GADL1-201ENST00000282538 3759 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
SMIM6P0DI80 PIWIL1-201ENST00000245255 3897 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
SMIM6P0DI80 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.57
SMIM6P0DI80 ZNF606-201ENST00000341164 4248 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
SMIM6P0DI80 MAGEL2-201ENST00000532292 4298 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
SMIM6P0DI80 PDP1-202ENST00000396200 4358 ntAPPRIS ALT1 TSL 4 BASIC11.48□□□□□ -0.57
SMIM6P0DI80 ACIN1-222ENST00000557515 2751 ntTSL 5 BASIC11.48□□□□□ -0.57
SMIM6P0DI80 CNTLN-201ENST00000380641 4871 ntAPPRIS ALT2 TSL 2 BASIC11.48□□□□□ -0.57
SMIM6P0DI80 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
SMIM6P0DI80 SPHK2-208ENST00000599029 3085 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
SMIM6P0DI80 SKP2-209ENST00000620197 3255 ntTSL 2 BASIC11.48□□□□□ -0.57
SMIM6P0DI80 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
SMIM6P0DI80 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
SMIM6P0DI80 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
SMIM6P0DI80 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
SMIM6P0DI80 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
SMIM6P0DI80 AC099791.1-201ENST00000416440 715 ntBASIC11.48□□□□□ -0.57
SMIM6P0DI80 LINC01428-201ENST00000449581 874 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
SMIM6P0DI80 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
SMIM6P0DI80 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC11.48□□□□□ -0.57
SMIM6P0DI80 UNC93B8-201ENST00000511903 705 ntBASIC11.48□□□□□ -0.57
SMIM6P0DI80 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
SMIM6P0DI80 ARHGEF4-212ENST00000525839 3828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
SMIM6P0DI80 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC11.48□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms