Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
UBCP0CG48 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC13.63□□□□□ -0.23
UBCP0CG48 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
UBCP0CG48 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
UBCP0CG48 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC13.63□□□□□ -0.23
UBCP0CG48 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
UBCP0CG48 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
UBCP0CG48 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
UBCP0CG48 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
UBCP0CG48 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
UBCP0CG48 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC13.63□□□□□ -0.23
UBCP0CG48 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
UBCP0CG48 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
UBCP0CG48 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
UBCP0CG48 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC13.63□□□□□ -0.23
UBCP0CG48 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
UBCP0CG48 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC13.63□□□□□ -0.23
UBCP0CG48 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
UBCP0CG48 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
UBCP0CG48 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
UBCP0CG48 RPS19-201ENST00000221975 500 ntTSL 3 BASIC13.63□□□□□ -0.23
UBCP0CG48 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
UBCP0CG48 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
UBCP0CG48 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
UBCP0CG48 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
UBCP0CG48 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
UBCP0CG48 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
UBCP0CG48 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
UBCP0CG48 SPDYE17-201ENST00000412399 783 ntBASIC13.63□□□□□ -0.23
UBCP0CG48 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC13.63□□□□□ -0.23
UBCP0CG48 HTR5BP-201ENST00000430851 1154 ntBASIC13.63□□□□□ -0.23
UBCP0CG48 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC13.63□□□□□ -0.23
UBCP0CG48 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC13.63□□□□□ -0.23
UBCP0CG48 ALG1L8P-201ENST00000533887 760 ntBASIC13.63□□□□□ -0.23
UBCP0CG48 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC13.63□□□□□ -0.23
UBCP0CG48 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
UBCP0CG48 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
UBCP0CG48 AC018529.1-201ENST00000613063 361 ntBASIC13.63□□□□□ -0.23
UBCP0CG48 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
UBCP0CG48 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
UBCP0CG48 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
UBCP0CG48 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC13.63□□□□□ -0.23
UBCP0CG48 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
UBCP0CG48 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
UBCP0CG48 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
UBCP0CG48 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
UBCP0CG48 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
UBCP0CG48 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
UBCP0CG48 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
UBCP0CG48 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
UBCP0CG48 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC13.63□□□□□ -0.23
UBCP0CG48 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC13.63□□□□□ -0.23
UBCP0CG48 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
UBCP0CG48 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
UBCP0CG48 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC13.63□□□□□ -0.23
UBCP0CG48 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
UBCP0CG48 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC13.62□□□□□ -0.23
UBCP0CG48 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
UBCP0CG48 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC13.62□□□□□ -0.23
UBCP0CG48 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
UBCP0CG48 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
UBCP0CG48 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
UBCP0CG48 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC13.62□□□□□ -0.23
UBCP0CG48 GRN-214ENST00000589265 1632 ntTSL 5 BASIC13.62□□□□□ -0.23
UBCP0CG48 AMT-224ENST00000635808 1610 ntTSL 5 BASIC13.62□□□□□ -0.23
UBCP0CG48 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
UBCP0CG48 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
UBCP0CG48 PMP22-202ENST00000395936 816 ntTSL 3 BASIC13.62□□□□□ -0.23
UBCP0CG48 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
UBCP0CG48 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
UBCP0CG48 KRT18P32-201ENST00000424695 1287 ntBASIC13.62□□□□□ -0.23
UBCP0CG48 AC005237.2-201ENST00000434368 219 ntBASIC13.62□□□□□ -0.23
UBCP0CG48 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC13.62□□□□□ -0.23
UBCP0CG48 NME4-207ENST00000450036 985 ntTSL 3 BASIC13.62□□□□□ -0.23
UBCP0CG48 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC13.62□□□□□ -0.23
UBCP0CG48 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC13.62□□□□□ -0.23
UBCP0CG48 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
UBCP0CG48 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC13.62□□□□□ -0.23
UBCP0CG48 KRT18P58-201ENST00000527480 1120 ntBASIC13.62□□□□□ -0.23
UBCP0CG48 AC011467.4-201ENST00000594891 528 ntBASIC13.62□□□□□ -0.23
UBCP0CG48 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
UBCP0CG48 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
UBCP0CG48 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC13.62□□□□□ -0.23
UBCP0CG48 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
UBCP0CG48 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC13.62□□□□□ -0.23
UBCP0CG48 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
UBCP0CG48 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
UBCP0CG48 RER1-203ENST00000378513 3000 ntTSL 3 BASIC13.62□□□□□ -0.23
UBCP0CG48 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
UBCP0CG48 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
UBCP0CG48 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
UBCP0CG48 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC13.62□□□□□ -0.23
UBCP0CG48 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
UBCP0CG48 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
UBCP0CG48 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
UBCP0CG48 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
UBCP0CG48 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
UBCP0CG48 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
UBCP0CG48 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
UBCP0CG48 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms