Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
CHGBP05060 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CHGBP05060 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CHGBP05060 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC18.49■□□□□ 0.55
CHGBP05060 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
CHGBP05060 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
CHGBP05060 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC18.49■□□□□ 0.55
CHGBP05060 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CHGBP05060 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CHGBP05060 AC126365.1-201ENST00000578585 1514 ntBASIC18.49■□□□□ 0.55
CHGBP05060 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC18.49■□□□□ 0.55
CHGBP05060 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
CHGBP05060 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC18.48■□□□□ 0.55
CHGBP05060 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CHGBP05060 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
CHGBP05060 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
CHGBP05060 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
CHGBP05060 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC18.48■□□□□ 0.55
CHGBP05060 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CHGBP05060 GHSR-202ENST00000427970 912 ntBASIC18.48■□□□□ 0.55
CHGBP05060 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC18.48■□□□□ 0.55
CHGBP05060 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CHGBP05060 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC18.48■□□□□ 0.55
CHGBP05060 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CHGBP05060 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC18.48■□□□□ 0.55
CHGBP05060 NEU3-203ENST00000529024 581 ntTSL 3 BASIC18.48■□□□□ 0.55
CHGBP05060 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CHGBP05060 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC18.48■□□□□ 0.55
CHGBP05060 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC18.48■□□□□ 0.55
CHGBP05060 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC18.48■□□□□ 0.55
CHGBP05060 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
CHGBP05060 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC18.48■□□□□ 0.55
CHGBP05060 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
CHGBP05060 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
CHGBP05060 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CHGBP05060 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CHGBP05060 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC18.48■□□□□ 0.55
CHGBP05060 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
CHGBP05060 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CHGBP05060 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
CHGBP05060 AC134312.5-201ENST00000568031 1313 ntBASIC18.48■□□□□ 0.55
CHGBP05060 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CHGBP05060 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CHGBP05060 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
CHGBP05060 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC18.47■□□□□ 0.55
CHGBP05060 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CHGBP05060 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CHGBP05060 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC18.47■□□□□ 0.55
CHGBP05060 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC18.47■□□□□ 0.55
CHGBP05060 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CHGBP05060 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CHGBP05060 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CHGBP05060 AC092933.1-201ENST00000393644 945 ntBASIC18.47■□□□□ 0.55
CHGBP05060 RPL5P21-201ENST00000404620 815 ntBASIC18.47■□□□□ 0.55
CHGBP05060 BAATP1-201ENST00000412284 1225 ntBASIC18.47■□□□□ 0.55
CHGBP05060 KLF2P2-201ENST00000416807 1039 ntBASIC18.47■□□□□ 0.55
CHGBP05060 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC18.47■□□□□ 0.55
CHGBP05060 AC012441.1-201ENST00000446669 685 ntBASIC18.47■□□□□ 0.55
CHGBP05060 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC18.47■□□□□ 0.55
CHGBP05060 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC18.47■□□□□ 0.55
CHGBP05060 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CHGBP05060 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
CHGBP05060 AC022137.2-201ENST00000503482 481 ntBASIC18.47■□□□□ 0.55
CHGBP05060 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
CHGBP05060 KRT17P8-201ENST00000540749 863 ntBASIC18.47■□□□□ 0.55
CHGBP05060 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC18.47■□□□□ 0.55
CHGBP05060 AP001063.1-201ENST00000568332 529 ntBASIC18.47■□□□□ 0.55
CHGBP05060 BTNL10-201ENST00000595971 695 ntBASIC18.47■□□□□ 0.55
CHGBP05060 AL512343.1-201ENST00000605837 169 ntBASIC18.47■□□□□ 0.55
CHGBP05060 BX539320.1-201ENST00000623759 877 ntBASIC18.47■□□□□ 0.55
CHGBP05060 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC18.47■□□□□ 0.55
CHGBP05060 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
CHGBP05060 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CHGBP05060 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CHGBP05060 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC18.47■□□□□ 0.55
CHGBP05060 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CHGBP05060 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CHGBP05060 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
CHGBP05060 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
CHGBP05060 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CHGBP05060 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CHGBP05060 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC18.46■□□□□ 0.55
CHGBP05060 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CHGBP05060 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
CHGBP05060 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CHGBP05060 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CHGBP05060 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
CHGBP05060 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
CHGBP05060 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CHGBP05060 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC18.46■□□□□ 0.55
CHGBP05060 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CHGBP05060 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
CHGBP05060 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CHGBP05060 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CHGBP05060 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CHGBP05060 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
CHGBP05060 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CHGBP05060 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CHGBP05060 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
CHGBP05060 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 63.2 ms