Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
LTN1O94822 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
LTN1O94822 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
LTN1O94822 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
LTN1O94822 AL590440.2-201ENST00000641973 1595 ntBASIC19.97■□□□□ 0.79
LTN1O94822 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC19.97■□□□□ 0.79
LTN1O94822 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
LTN1O94822 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
LTN1O94822 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LTN1O94822 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LTN1O94822 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
LTN1O94822 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LTN1O94822 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
LTN1O94822 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
LTN1O94822 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
LTN1O94822 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC19.97■□□□□ 0.79
LTN1O94822 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
LTN1O94822 CMC1-204ENST00000423894 549 ntTSL 2 BASIC19.97■□□□□ 0.79
LTN1O94822 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC19.97■□□□□ 0.79
LTN1O94822 AC008267.1-201ENST00000474858 1069 ntBASIC19.97■□□□□ 0.79
LTN1O94822 AC006122.1-201ENST00000493323 440 ntBASIC19.97■□□□□ 0.79
LTN1O94822 GCOM2-201ENST00000509133 1104 ntBASIC19.97■□□□□ 0.79
LTN1O94822 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC19.97■□□□□ 0.79
LTN1O94822 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
LTN1O94822 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
LTN1O94822 GHRHR-212ENST00000611037 923 ntTSL 5 BASIC19.97■□□□□ 0.79
LTN1O94822 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LTN1O94822 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
LTN1O94822 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
LTN1O94822 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC19.97■□□□□ 0.79
LTN1O94822 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LTN1O94822 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC19.96■□□□□ 0.79
LTN1O94822 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
LTN1O94822 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LTN1O94822 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
LTN1O94822 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC19.96■□□□□ 0.79
LTN1O94822 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC19.96■□□□□ 0.79
LTN1O94822 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
LTN1O94822 AC023024.2-201ENST00000623561 1993 ntBASIC19.96■□□□□ 0.79
LTN1O94822 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LTN1O94822 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
LTN1O94822 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
LTN1O94822 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
LTN1O94822 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
LTN1O94822 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LTN1O94822 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
LTN1O94822 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC19.96■□□□□ 0.79
LTN1O94822 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC19.96■□□□□ 0.79
LTN1O94822 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
LTN1O94822 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
LTN1O94822 AC091390.4-201ENST00000484974 491 ntTSL 3 BASIC19.96■□□□□ 0.79
LTN1O94822 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC19.96■□□□□ 0.79
LTN1O94822 MIR3677-201ENST00000578964 60 ntBASIC19.96■□□□□ 0.79
LTN1O94822 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC19.96■□□□□ 0.79
LTN1O94822 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC19.96■□□□□ 0.79
LTN1O94822 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC19.96■□□□□ 0.79
LTN1O94822 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
LTN1O94822 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
LTN1O94822 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
LTN1O94822 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC19.96■□□□□ 0.79
LTN1O94822 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
LTN1O94822 AP003680.1-201ENST00000598970 3660 ntBASIC19.96■□□□□ 0.79
LTN1O94822 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC19.96■□□□□ 0.79
LTN1O94822 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LTN1O94822 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC19.96■□□□□ 0.79
LTN1O94822 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
LTN1O94822 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC19.96■□□□□ 0.79
LTN1O94822 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LTN1O94822 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC19.96■□□□□ 0.79
LTN1O94822 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LTN1O94822 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC19.96■□□□□ 0.79
LTN1O94822 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
LTN1O94822 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
LTN1O94822 AC006480.2-201ENST00000609770 1337 ntBASIC19.96■□□□□ 0.79
LTN1O94822 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC19.95■□□□□ 0.78
LTN1O94822 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
LTN1O94822 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
LTN1O94822 AIMP2-202ENST00000395236 860 ntTSL 2 BASIC19.95■□□□□ 0.78
LTN1O94822 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
LTN1O94822 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
LTN1O94822 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC19.95■□□□□ 0.78
LTN1O94822 MPRIPP1-201ENST00000452433 1089 ntBASIC19.95■□□□□ 0.78
LTN1O94822 NDUFS6P1-201ENST00000485187 316 ntBASIC19.95■□□□□ 0.78
LTN1O94822 AC242376.1-201ENST00000559033 726 ntBASIC19.95■□□□□ 0.78
LTN1O94822 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC19.95■□□□□ 0.78
LTN1O94822 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
LTN1O94822 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
LTN1O94822 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LTN1O94822 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC19.95■□□□□ 0.78
LTN1O94822 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
LTN1O94822 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
LTN1O94822 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC19.95■□□□□ 0.78
LTN1O94822 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LTN1O94822 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LTN1O94822 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
LTN1O94822 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
LTN1O94822 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
LTN1O94822 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC19.95■□□□□ 0.78
LTN1O94822 VPS18-202ENST00000558474 873 ntTSL 3 BASIC19.95■□□□□ 0.78
LTN1O94822 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC19.95■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms