Protein–RNA interactions for Protein: O75677

RFPL1, Ret finger protein-like 1, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL1O75677 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RFPL1O75677 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC15.56■□□□□ 0.08
RFPL1O75677 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RFPL1O75677 HACD3-206ENST00000565299 1465 ntTSL 5 BASIC15.56■□□□□ 0.08
RFPL1O75677 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC15.56■□□□□ 0.08
RFPL1O75677 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RFPL1O75677 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC15.56■□□□□ 0.08
RFPL1O75677 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC15.56■□□□□ 0.08
RFPL1O75677 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
RFPL1O75677 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
RFPL1O75677 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
RFPL1O75677 AP000845.1-201ENST00000581677 2131 ntBASIC15.56■□□□□ 0.08
RFPL1O75677 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
RFPL1O75677 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
RFPL1O75677 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
RFPL1O75677 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
RFPL1O75677 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RFPL1O75677 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RFPL1O75677 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
RFPL1O75677 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
RFPL1O75677 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RFPL1O75677 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
RFPL1O75677 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RFPL1O75677 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RFPL1O75677 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RFPL1O75677 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
RFPL1O75677 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RFPL1O75677 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RFPL1O75677 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RFPL1O75677 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC15.55■□□□□ 0.08
RFPL1O75677 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RFPL1O75677 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC15.55■□□□□ 0.08
RFPL1O75677 PITX2-204ENST00000394595 1693 ntTSL 5 BASIC15.55■□□□□ 0.08
RFPL1O75677 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
RFPL1O75677 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
RFPL1O75677 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
RFPL1O75677 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RFPL1O75677 GK-202ENST00000378941 458 ntTSL 3 BASIC15.55■□□□□ 0.08
RFPL1O75677 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RFPL1O75677 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC15.55■□□□□ 0.08
RFPL1O75677 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC15.55■□□□□ 0.08
RFPL1O75677 PPP6R2P1-201ENST00000450880 1275 ntBASIC15.55■□□□□ 0.08
RFPL1O75677 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC15.55■□□□□ 0.08
RFPL1O75677 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC15.55■□□□□ 0.08
RFPL1O75677 AC027307.3-201ENST00000594262 1100 ntBASIC15.55■□□□□ 0.08
RFPL1O75677 CECR7-204ENST00000609932 568 ntTSL 2 BASIC15.55■□□□□ 0.08
RFPL1O75677 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC15.55■□□□□ 0.08
RFPL1O75677 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RFPL1O75677 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RFPL1O75677 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC15.55■□□□□ 0.08
RFPL1O75677 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
RFPL1O75677 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
RFPL1O75677 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
RFPL1O75677 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
RFPL1O75677 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC15.55■□□□□ 0.08
RFPL1O75677 AC139749.1-202ENST00000617529 3139 ntBASIC15.54■□□□□ 0.08
RFPL1O75677 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC15.54■□□□□ 0.08
RFPL1O75677 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC15.54■□□□□ 0.08
RFPL1O75677 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
RFPL1O75677 GRK6P1-201ENST00000400595 1711 ntBASIC15.54■□□□□ 0.08
RFPL1O75677 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
RFPL1O75677 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RFPL1O75677 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
RFPL1O75677 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC15.54■□□□□ 0.08
RFPL1O75677 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
RFPL1O75677 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC15.54■□□□□ 0.08
RFPL1O75677 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RFPL1O75677 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RFPL1O75677 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RFPL1O75677 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
RFPL1O75677 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RFPL1O75677 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
RFPL1O75677 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
RFPL1O75677 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RFPL1O75677 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
RFPL1O75677 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC15.54■□□□□ 0.08
RFPL1O75677 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
RFPL1O75677 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC15.54■□□□□ 0.08
RFPL1O75677 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC15.54■□□□□ 0.08
RFPL1O75677 GAPDHP21-201ENST00000450301 1010 ntBASIC15.54■□□□□ 0.08
RFPL1O75677 AC097493.3-201ENST00000509725 367 ntBASIC15.54■□□□□ 0.08
RFPL1O75677 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
RFPL1O75677 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC15.54■□□□□ 0.08
RFPL1O75677 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC15.54■□□□□ 0.08
RFPL1O75677 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC15.54■□□□□ 0.08
RFPL1O75677 AL358472.5-202ENST00000641448 1267 ntBASIC15.54■□□□□ 0.08
RFPL1O75677 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC15.54■□□□□ 0.08
RFPL1O75677 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
RFPL1O75677 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RFPL1O75677 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RFPL1O75677 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC15.54■□□□□ 0.08
RFPL1O75677 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
RFPL1O75677 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC15.54■□□□□ 0.08
RFPL1O75677 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
RFPL1O75677 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
RFPL1O75677 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
RFPL1O75677 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
RFPL1O75677 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
RFPL1O75677 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
RFPL1O75677 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms