Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PCDHGA12O60330 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
PCDHGA12O60330 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
PCDHGA12O60330 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
PCDHGA12O60330 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
PCDHGA12O60330 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
PCDHGA12O60330 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
PCDHGA12O60330 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
PCDHGA12O60330 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC15.36■□□□□ 0.05
PCDHGA12O60330 AGER-206ENST00000375070 1463 ntTSL 5 BASIC15.36■□□□□ 0.05
PCDHGA12O60330 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
PCDHGA12O60330 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PCDHGA12O60330 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PCDHGA12O60330 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
PCDHGA12O60330 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
PCDHGA12O60330 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
PCDHGA12O60330 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
PCDHGA12O60330 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
PCDHGA12O60330 AC099548.2-209ENST00000480264 625 ntBASIC15.36■□□□□ 0.05
PCDHGA12O60330 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
PCDHGA12O60330 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC15.36■□□□□ 0.05
PCDHGA12O60330 AC022137.2-201ENST00000503482 481 ntBASIC15.36■□□□□ 0.05
PCDHGA12O60330 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC15.36■□□□□ 0.05
PCDHGA12O60330 AC106760.1-201ENST00000508690 800 ntBASIC15.36■□□□□ 0.05
PCDHGA12O60330 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
PCDHGA12O60330 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC15.36■□□□□ 0.05
PCDHGA12O60330 IGHV3OR16-16-201ENST00000563644 343 ntBASIC15.36■□□□□ 0.05
PCDHGA12O60330 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC15.36■□□□□ 0.05
PCDHGA12O60330 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
PCDHGA12O60330 ATF5-205ENST00000600336 682 ntTSL 2 BASIC15.36■□□□□ 0.05
PCDHGA12O60330 AL450472.2-201ENST00000603663 1156 ntBASIC15.36■□□□□ 0.05
PCDHGA12O60330 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC15.36■□□□□ 0.05
PCDHGA12O60330 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC15.36■□□□□ 0.05
PCDHGA12O60330 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC15.36■□□□□ 0.05
PCDHGA12O60330 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC15.36■□□□□ 0.05
PCDHGA12O60330 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
PCDHGA12O60330 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PCDHGA12O60330 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
PCDHGA12O60330 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
PCDHGA12O60330 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PCDHGA12O60330 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PCDHGA12O60330 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
PCDHGA12O60330 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
PCDHGA12O60330 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC15.36■□□□□ 0.05
PCDHGA12O60330 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC15.36■□□□□ 0.05
PCDHGA12O60330 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC15.36■□□□□ 0.05
PCDHGA12O60330 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC15.36■□□□□ 0.05
PCDHGA12O60330 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PCDHGA12O60330 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC15.35■□□□□ 0.05
PCDHGA12O60330 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
PCDHGA12O60330 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
PCDHGA12O60330 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PCDHGA12O60330 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PCDHGA12O60330 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
PCDHGA12O60330 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
PCDHGA12O60330 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
PCDHGA12O60330 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
PCDHGA12O60330 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC15.35■□□□□ 0.05
PCDHGA12O60330 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
PCDHGA12O60330 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC15.35■□□□□ 0.05
PCDHGA12O60330 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC15.35■□□□□ 0.05
PCDHGA12O60330 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PCDHGA12O60330 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
PCDHGA12O60330 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PCDHGA12O60330 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC15.35■□□□□ 0.05
PCDHGA12O60330 TEX30-203ENST00000376022 828 ntTSL 2 BASIC15.35■□□□□ 0.05
PCDHGA12O60330 MIR1247-201ENST00000408206 136 ntBASIC15.35■□□□□ 0.05
PCDHGA12O60330 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC15.35■□□□□ 0.05
PCDHGA12O60330 AC026954.1-201ENST00000429771 1293 ntBASIC15.35■□□□□ 0.05
PCDHGA12O60330 C2orf27AP3-201ENST00000434123 579 ntBASIC15.35■□□□□ 0.05
PCDHGA12O60330 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC15.35■□□□□ 0.05
PCDHGA12O60330 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC15.35■□□□□ 0.05
PCDHGA12O60330 KRT18P43-201ENST00000469825 1281 ntBASIC15.35■□□□□ 0.05
PCDHGA12O60330 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC15.35■□□□□ 0.05
PCDHGA12O60330 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC15.35■□□□□ 0.05
PCDHGA12O60330 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
PCDHGA12O60330 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
PCDHGA12O60330 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC15.35■□□□□ 0.05
PCDHGA12O60330 RN7SL560P-201ENST00000577943 264 ntBASIC15.35■□□□□ 0.05
PCDHGA12O60330 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
PCDHGA12O60330 AL354718.3-201ENST00000616414 581 ntBASIC15.35■□□□□ 0.05
PCDHGA12O60330 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC15.35■□□□□ 0.05
PCDHGA12O60330 CR382287.1-201ENST00000623954 586 ntBASIC15.35■□□□□ 0.05
PCDHGA12O60330 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
PCDHGA12O60330 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PCDHGA12O60330 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PCDHGA12O60330 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
PCDHGA12O60330 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PCDHGA12O60330 AC073347.1-201ENST00000421633 2643 ntBASIC15.35■□□□□ 0.05
PCDHGA12O60330 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
PCDHGA12O60330 AL136379.1-201ENST00000623471 2642 ntBASIC15.35■□□□□ 0.05
PCDHGA12O60330 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PCDHGA12O60330 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
PCDHGA12O60330 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PCDHGA12O60330 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
PCDHGA12O60330 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PCDHGA12O60330 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
PCDHGA12O60330 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
PCDHGA12O60330 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC15.35■□□□□ 0.05
PCDHGA12O60330 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC15.35■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms