Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TO15178 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TO15178 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
TO15178 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC14.26□□□□□ -0.13
TO15178 AC124283.3-201ENST00000570869 594 ntBASIC14.26□□□□□ -0.13
TO15178 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC14.26□□□□□ -0.13
TO15178 CTBP2P3-201ENST00000585629 1255 ntBASIC14.26□□□□□ -0.13
TO15178 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC14.26□□□□□ -0.13
TO15178 AC107373.2-201ENST00000607735 490 ntBASIC14.26□□□□□ -0.13
TO15178 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC14.26□□□□□ -0.13
TO15178 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC14.26□□□□□ -0.13
TO15178 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC14.26□□□□□ -0.13
TO15178 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TO15178 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TO15178 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
TO15178 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
TO15178 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC14.26□□□□□ -0.13
TO15178 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
TO15178 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC14.26□□□□□ -0.13
TO15178 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
TO15178 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
TO15178 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
TO15178 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
TO15178 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
TO15178 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC14.25□□□□□ -0.13
TO15178 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TO15178 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC14.25□□□□□ -0.13
TO15178 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TO15178 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
TO15178 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TO15178 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC14.25□□□□□ -0.13
TO15178 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
TO15178 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
TO15178 AC126177.1-201ENST00000547829 2218 ntBASIC14.25□□□□□ -0.13
TO15178 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TO15178 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TO15178 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TO15178 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TO15178 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC14.25□□□□□ -0.13
TO15178 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TO15178 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TO15178 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TO15178 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
TO15178 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC14.25□□□□□ -0.13
TO15178 GALT-202ENST00000450095 1280 ntTSL 2 BASIC14.25□□□□□ -0.13
TO15178 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC14.25□□□□□ -0.13
TO15178 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC14.25□□□□□ -0.13
TO15178 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
TO15178 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC14.25□□□□□ -0.13
TO15178 AC133539.2-201ENST00000604757 467 ntBASIC14.25□□□□□ -0.13
TO15178 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TO15178 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TO15178 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC14.25□□□□□ -0.13
TO15178 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC14.25□□□□□ -0.13
TO15178 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
TO15178 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TO15178 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TO15178 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TO15178 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TO15178 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TO15178 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TO15178 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TO15178 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
TO15178 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
TO15178 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
TO15178 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
TO15178 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TO15178 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
TO15178 KRT8P22-201ENST00000562317 1415 ntBASIC14.24□□□□□ -0.13
TO15178 AC148477.4-201ENST00000613430 1793 ntBASIC14.24□□□□□ -0.13
TO15178 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TO15178 AL109954.1-202ENST00000564051 2148 ntBASIC14.24□□□□□ -0.13
TO15178 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
TO15178 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
TO15178 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC14.24□□□□□ -0.13
TO15178 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
TO15178 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TO15178 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
TO15178 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
TO15178 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TO15178 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TO15178 AL138799.1-201ENST00000448213 1675 ntBASIC14.24□□□□□ -0.13
TO15178 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC14.24□□□□□ -0.13
TO15178 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TO15178 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC14.24□□□□□ -0.13
TO15178 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC14.24□□□□□ -0.13
TO15178 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
TO15178 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TO15178 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TO15178 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
TO15178 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC14.24□□□□□ -0.13
TO15178 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC14.24□□□□□ -0.13
TO15178 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TO15178 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TO15178 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TO15178 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
TO15178 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
TO15178 AC098614.1-201ENST00000368528 745 ntBASIC14.24□□□□□ -0.13
TO15178 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
TO15178 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms