Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC12.45□□□□□ -0.42
UPK2O00526 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
UPK2O00526 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC12.45□□□□□ -0.42
UPK2O00526 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
UPK2O00526 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
UPK2O00526 ACE3P-201ENST00000423435 1973 ntBASIC12.45□□□□□ -0.42
UPK2O00526 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC12.45□□□□□ -0.42
UPK2O00526 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
UPK2O00526 AL009178.2-201ENST00000597278 2719 ntBASIC12.45□□□□□ -0.42
UPK2O00526 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
UPK2O00526 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC12.45□□□□□ -0.42
UPK2O00526 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
UPK2O00526 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
UPK2O00526 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
UPK2O00526 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
UPK2O00526 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC12.44□□□□□ -0.42
UPK2O00526 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC12.44□□□□□ -0.42
UPK2O00526 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
UPK2O00526 GOLGA6L17P-202ENST00000614358 1398 ntBASIC12.44□□□□□ -0.42
UPK2O00526 AL136379.1-201ENST00000623471 2642 ntBASIC12.44□□□□□ -0.42
UPK2O00526 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC12.44□□□□□ -0.42
UPK2O00526 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
UPK2O00526 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
UPK2O00526 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
UPK2O00526 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
UPK2O00526 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
UPK2O00526 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
UPK2O00526 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
UPK2O00526 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC12.44□□□□□ -0.42
UPK2O00526 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
UPK2O00526 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
UPK2O00526 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
UPK2O00526 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC12.44□□□□□ -0.42
UPK2O00526 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
UPK2O00526 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
UPK2O00526 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
UPK2O00526 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
UPK2O00526 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
UPK2O00526 RPL37AP1-201ENST00000412502 279 ntBASIC12.44□□□□□ -0.42
UPK2O00526 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
UPK2O00526 AC015922.1-201ENST00000421102 1152 ntBASIC12.44□□□□□ -0.42
UPK2O00526 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC12.44□□□□□ -0.42
UPK2O00526 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
UPK2O00526 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC12.44□□□□□ -0.42
UPK2O00526 DHDH-204ENST00000523250 634 ntTSL 5 BASIC12.44□□□□□ -0.42
UPK2O00526 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC12.44□□□□□ -0.42
UPK2O00526 AC069262.1-201ENST00000539058 672 ntBASIC12.44□□□□□ -0.42
UPK2O00526 CBFB-203ENST00000561924 584 ntTSL 5 BASIC12.44□□□□□ -0.42
UPK2O00526 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC12.44□□□□□ -0.42
UPK2O00526 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
UPK2O00526 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC12.44□□□□□ -0.42
UPK2O00526 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
UPK2O00526 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
UPK2O00526 COQ4-205ENST00000609948 956 ntTSL 2 BASIC12.44□□□□□ -0.42
UPK2O00526 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC12.44□□□□□ -0.42
UPK2O00526 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC12.44□□□□□ -0.42
UPK2O00526 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC12.44□□□□□ -0.42
UPK2O00526 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
UPK2O00526 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
UPK2O00526 GOLGA8DP-202ENST00000341390 2184 ntBASIC12.44□□□□□ -0.42
UPK2O00526 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC12.44□□□□□ -0.42
UPK2O00526 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
UPK2O00526 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC12.44□□□□□ -0.42
UPK2O00526 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC12.44□□□□□ -0.42
UPK2O00526 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
UPK2O00526 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
UPK2O00526 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
UPK2O00526 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
UPK2O00526 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
UPK2O00526 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
UPK2O00526 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
UPK2O00526 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC12.44□□□□□ -0.42
UPK2O00526 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
UPK2O00526 ENDOD1-201ENST00000278505 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
UPK2O00526 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
UPK2O00526 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC12.44□□□□□ -0.42
UPK2O00526 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
UPK2O00526 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
UPK2O00526 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
UPK2O00526 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
UPK2O00526 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC12.43□□□□□ -0.42
UPK2O00526 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC12.43□□□□□ -0.42
UPK2O00526 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
UPK2O00526 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
UPK2O00526 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
UPK2O00526 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
UPK2O00526 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
UPK2O00526 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
UPK2O00526 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
UPK2O00526 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
UPK2O00526 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
UPK2O00526 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC12.43□□□□□ -0.42
UPK2O00526 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
UPK2O00526 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC12.43□□□□□ -0.42
UPK2O00526 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC12.43□□□□□ -0.42
UPK2O00526 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
UPK2O00526 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
UPK2O00526 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
UPK2O00526 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
UPK2O00526 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms