Protein–RNA interactions for Protein: O00206

TLR4, Toll-like receptor 4, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR4O00206 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
TLR4O00206 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TLR4O00206 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TLR4O00206 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TLR4O00206 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.04
TLR4O00206 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TLR4O00206 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC15.33■□□□□ 0.04
TLR4O00206 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TLR4O00206 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TLR4O00206 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TLR4O00206 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TLR4O00206 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TLR4O00206 POLL-217ENST00000628479 1953 ntTSL 5 BASIC15.33■□□□□ 0.04
TLR4O00206 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TLR4O00206 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
TLR4O00206 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TLR4O00206 AL133338.1-201ENST00000565695 1517 ntBASIC15.33■□□□□ 0.04
TLR4O00206 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
TLR4O00206 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TLR4O00206 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC15.32■□□□□ 0.04
TLR4O00206 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC15.32■□□□□ 0.04
TLR4O00206 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TLR4O00206 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TLR4O00206 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
TLR4O00206 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
TLR4O00206 AL138799.1-201ENST00000448213 1675 ntBASIC15.32■□□□□ 0.04
TLR4O00206 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TLR4O00206 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TLR4O00206 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TLR4O00206 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC15.32■□□□□ 0.04
TLR4O00206 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
TLR4O00206 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TLR4O00206 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TLR4O00206 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
TLR4O00206 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC15.32■□□□□ 0.04
TLR4O00206 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
TLR4O00206 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC15.32■□□□□ 0.04
TLR4O00206 AC108725.1-201ENST00000495472 409 ntBASIC15.32■□□□□ 0.04
TLR4O00206 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC15.32■□□□□ 0.04
TLR4O00206 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC15.32■□□□□ 0.04
TLR4O00206 AC023310.1-201ENST00000554836 735 ntBASIC15.32■□□□□ 0.04
TLR4O00206 DUX4L45-201ENST00000566406 1057 ntBASIC15.32■□□□□ 0.04
TLR4O00206 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC15.32■□□□□ 0.04
TLR4O00206 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC15.32■□□□□ 0.04
TLR4O00206 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TLR4O00206 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
TLR4O00206 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC15.32■□□□□ 0.04
TLR4O00206 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TLR4O00206 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC15.32■□□□□ 0.04
TLR4O00206 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC15.32■□□□□ 0.04
TLR4O00206 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TLR4O00206 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TLR4O00206 AC020907.1-201ENST00000616460 1350 ntBASIC15.32■□□□□ 0.04
TLR4O00206 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC15.32■□□□□ 0.04
TLR4O00206 NORAD-201ENST00000565493 5339 ntBASIC15.32■□□□□ 0.04
TLR4O00206 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
TLR4O00206 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TLR4O00206 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
TLR4O00206 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TLR4O00206 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
TLR4O00206 AMT-233ENST00000636522 1620 ntTSL 2 BASIC15.32■□□□□ 0.04
TLR4O00206 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC15.32■□□□□ 0.04
TLR4O00206 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC15.31■□□□□ 0.04
TLR4O00206 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
TLR4O00206 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
TLR4O00206 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TLR4O00206 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TLR4O00206 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC15.31■□□□□ 0.04
TLR4O00206 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TLR4O00206 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC15.31■□□□□ 0.04
TLR4O00206 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
TLR4O00206 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC15.31■□□□□ 0.04
TLR4O00206 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TLR4O00206 CASK-202ENST00000378158 3848 ntTSL 5 BASIC15.31■□□□□ 0.04
TLR4O00206 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TLR4O00206 NME6-203ENST00000415644 849 ntTSL 2 BASIC15.31■□□□□ 0.04
TLR4O00206 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TLR4O00206 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TLR4O00206 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TLR4O00206 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TLR4O00206 AHRR-211ENST00000515206 462 ntTSL 5 BASIC15.31■□□□□ 0.04
TLR4O00206 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC15.31■□□□□ 0.04
TLR4O00206 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC15.31■□□□□ 0.04
TLR4O00206 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC15.31■□□□□ 0.04
TLR4O00206 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC15.31■□□□□ 0.04
TLR4O00206 AC009542.2-202ENST00000619004 1067 ntBASIC15.31■□□□□ 0.04
TLR4O00206 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC15.31■□□□□ 0.04
TLR4O00206 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TLR4O00206 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC15.31■□□□□ 0.04
TLR4O00206 ANKRD26P3-201ENST00000454044 2748 ntBASIC15.31■□□□□ 0.04
TLR4O00206 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
TLR4O00206 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
TLR4O00206 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
TLR4O00206 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TLR4O00206 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TLR4O00206 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TLR4O00206 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC15.31■□□□□ 0.04
TLR4O00206 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC15.31■□□□□ 0.04
TLR4O00206 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TLR4O00206 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms