Protein–RNA interactions for Protein: D6REC4

CFAP99, Cilia- and flagella-associated protein 99, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP99D6REC4 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC15.52■□□□□ 0.08
CFAP99D6REC4 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC15.52■□□□□ 0.08
CFAP99D6REC4 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC15.52■□□□□ 0.08
CFAP99D6REC4 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CFAP99D6REC4 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CFAP99D6REC4 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
CFAP99D6REC4 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CFAP99D6REC4 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CFAP99D6REC4 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC15.52■□□□□ 0.08
CFAP99D6REC4 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC15.52■□□□□ 0.08
CFAP99D6REC4 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC15.52■□□□□ 0.08
CFAP99D6REC4 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CFAP99D6REC4 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC15.52■□□□□ 0.08
CFAP99D6REC4 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
CFAP99D6REC4 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CFAP99D6REC4 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CFAP99D6REC4 AL133267.1-201ENST00000398220 340 ntBASIC15.52■□□□□ 0.08
CFAP99D6REC4 MEP1AP4-201ENST00000423244 1087 ntBASIC15.52■□□□□ 0.08
CFAP99D6REC4 RASL12-203ENST00000434605 982 ntTSL 2 BASIC15.52■□□□□ 0.08
CFAP99D6REC4 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC15.52■□□□□ 0.08
CFAP99D6REC4 KRT18P43-201ENST00000469825 1281 ntBASIC15.52■□□□□ 0.08
CFAP99D6REC4 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
CFAP99D6REC4 AC104794.3-201ENST00000566840 1248 ntBASIC15.52■□□□□ 0.08
CFAP99D6REC4 SRD5A3P1-201ENST00000603021 949 ntBASIC15.52■□□□□ 0.08
CFAP99D6REC4 RNA5-8SN1-201ENST00000610460 153 ntBASIC15.52■□□□□ 0.08
CFAP99D6REC4 RNA5-8SN5-202ENST00000612463 153 ntBASIC15.52■□□□□ 0.08
CFAP99D6REC4 RNA5-8SN4-201ENST00000613359 153 ntBASIC15.52■□□□□ 0.08
CFAP99D6REC4 RNA5-8SN5-201ENST00000619471 153 ntBASIC15.52■□□□□ 0.08
CFAP99D6REC4 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CFAP99D6REC4 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
CFAP99D6REC4 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CFAP99D6REC4 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC15.52■□□□□ 0.07
CFAP99D6REC4 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
CFAP99D6REC4 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.07
CFAP99D6REC4 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CFAP99D6REC4 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CFAP99D6REC4 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
CFAP99D6REC4 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC15.52■□□□□ 0.07
CFAP99D6REC4 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
CFAP99D6REC4 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC15.52■□□□□ 0.07
CFAP99D6REC4 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.07
CFAP99D6REC4 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CFAP99D6REC4 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC15.51■□□□□ 0.07
CFAP99D6REC4 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CFAP99D6REC4 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CFAP99D6REC4 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CFAP99D6REC4 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CFAP99D6REC4 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CFAP99D6REC4 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CFAP99D6REC4 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CFAP99D6REC4 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CFAP99D6REC4 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CFAP99D6REC4 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CFAP99D6REC4 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CFAP99D6REC4 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
CFAP99D6REC4 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CFAP99D6REC4 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC15.51■□□□□ 0.07
CFAP99D6REC4 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CFAP99D6REC4 FAM207CP-201ENST00000443486 507 ntBASIC15.51■□□□□ 0.07
CFAP99D6REC4 TSPY16P-201ENST00000449843 468 ntBASIC15.51■□□□□ 0.07
CFAP99D6REC4 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CFAP99D6REC4 DOC2GP-202ENST00000514950 1163 ntBASIC15.51■□□□□ 0.07
CFAP99D6REC4 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC15.51■□□□□ 0.07
CFAP99D6REC4 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC15.51■□□□□ 0.07
CFAP99D6REC4 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
CFAP99D6REC4 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC15.51■□□□□ 0.07
CFAP99D6REC4 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CFAP99D6REC4 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
CFAP99D6REC4 UNC13B-201ENST00000378495 6303 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
CFAP99D6REC4 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CFAP99D6REC4 AC105250.1-201ENST00000509378 2057 ntBASIC15.51■□□□□ 0.07
CFAP99D6REC4 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
CFAP99D6REC4 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CFAP99D6REC4 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
CFAP99D6REC4 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
CFAP99D6REC4 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
CFAP99D6REC4 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
CFAP99D6REC4 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CFAP99D6REC4 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC15.51■□□□□ 0.07
CFAP99D6REC4 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CFAP99D6REC4 TK1-203ENST00000588734 1681 ntTSL 2 BASIC15.51■□□□□ 0.07
CFAP99D6REC4 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
CFAP99D6REC4 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CFAP99D6REC4 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
CFAP99D6REC4 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
CFAP99D6REC4 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CFAP99D6REC4 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC15.5■□□□□ 0.07
CFAP99D6REC4 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
CFAP99D6REC4 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CFAP99D6REC4 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CFAP99D6REC4 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CFAP99D6REC4 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
CFAP99D6REC4 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
CFAP99D6REC4 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
CFAP99D6REC4 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CFAP99D6REC4 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CFAP99D6REC4 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
CFAP99D6REC4 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC15.5■□□□□ 0.07
CFAP99D6REC4 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC15.5■□□□□ 0.07
CFAP99D6REC4 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms