Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 KNDC1-201ENST00000304613 6793 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC66A2RUB6 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC66A2RUB6 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
CCDC66A2RUB6 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
CCDC66A2RUB6 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
CCDC66A2RUB6 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC16.88■□□□□ 0.29
CCDC66A2RUB6 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC66A2RUB6 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC16.88■□□□□ 0.29
CCDC66A2RUB6 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC66A2RUB6 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC16.88■□□□□ 0.29
CCDC66A2RUB6 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
CCDC66A2RUB6 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
CCDC66A2RUB6 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC16.88■□□□□ 0.29
CCDC66A2RUB6 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC16.88■□□□□ 0.29
CCDC66A2RUB6 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC16.88■□□□□ 0.29
CCDC66A2RUB6 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC16.88■□□□□ 0.29
CCDC66A2RUB6 MAL2-202ENST00000531508 892 ntTSL 3 BASIC16.88■□□□□ 0.29
CCDC66A2RUB6 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC66A2RUB6 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
CCDC66A2RUB6 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC66A2RUB6 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC66A2RUB6 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC66A2RUB6 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC66A2RUB6 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC66A2RUB6 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC16.88■□□□□ 0.29
CCDC66A2RUB6 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC66A2RUB6 REM2-202ENST00000536884 1331 ntTSL 2 BASIC16.88■□□□□ 0.29
CCDC66A2RUB6 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC66A2RUB6 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC66A2RUB6 TOR1AIP1-201ENST00000271583 3044 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
CCDC66A2RUB6 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CCDC66A2RUB6 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC16.88■□□□□ 0.29
CCDC66A2RUB6 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC16.87■□□□□ 0.29
CCDC66A2RUB6 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
CCDC66A2RUB6 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
CCDC66A2RUB6 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC66A2RUB6 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC66A2RUB6 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC66A2RUB6 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC16.87■□□□□ 0.29
CCDC66A2RUB6 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
CCDC66A2RUB6 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC16.87■□□□□ 0.29
CCDC66A2RUB6 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC66A2RUB6 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC66A2RUB6 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC66A2RUB6 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC66A2RUB6 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC16.87■□□□□ 0.29
CCDC66A2RUB6 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
CCDC66A2RUB6 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC16.87■□□□□ 0.29
CCDC66A2RUB6 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC16.87■□□□□ 0.29
CCDC66A2RUB6 AC034105.1-201ENST00000563488 319 ntBASIC16.87■□□□□ 0.29
CCDC66A2RUB6 AC018845.2-201ENST00000568326 409 ntBASIC16.87■□□□□ 0.29
CCDC66A2RUB6 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC16.87■□□□□ 0.29
CCDC66A2RUB6 AC068137.2-201ENST00000605408 478 ntBASIC16.87■□□□□ 0.29
CCDC66A2RUB6 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC66A2RUB6 SELENON-203ENST00000374315 4212 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
CCDC66A2RUB6 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC16.87■□□□□ 0.29
CCDC66A2RUB6 KLHDC2-206ENST00000554589 1641 ntTSL 5 BASIC16.87■□□□□ 0.29
CCDC66A2RUB6 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC66A2RUB6 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC16.87■□□□□ 0.29
CCDC66A2RUB6 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC66A2RUB6 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
CCDC66A2RUB6 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC66A2RUB6 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC66A2RUB6 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC66A2RUB6 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC66A2RUB6 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC16.87■□□□□ 0.29
CCDC66A2RUB6 USP28-214ENST00000545540 3431 ntTSL 2 BASIC16.87■□□□□ 0.29
CCDC66A2RUB6 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC66A2RUB6 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC66A2RUB6 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
CCDC66A2RUB6 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC66A2RUB6 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC16.87■□□□□ 0.29
CCDC66A2RUB6 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC66A2RUB6 SELENON-202ENST00000361547 4334 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
CCDC66A2RUB6 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC66A2RUB6 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC66A2RUB6 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC16.86■□□□□ 0.29
CCDC66A2RUB6 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC66A2RUB6 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
CCDC66A2RUB6 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC16.86■□□□□ 0.29
CCDC66A2RUB6 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC66A2RUB6 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC16.86■□□□□ 0.29
CCDC66A2RUB6 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC66A2RUB6 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC16.86■□□□□ 0.29
CCDC66A2RUB6 GSN-215ENST00000545652 2428 ntTSL 2 BASIC16.86■□□□□ 0.29
CCDC66A2RUB6 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC66A2RUB6 NARF-206ENST00000457415 1668 ntTSL 5 BASIC16.86■□□□□ 0.29
CCDC66A2RUB6 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC16.86■□□□□ 0.29
CCDC66A2RUB6 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC66A2RUB6 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC66A2RUB6 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC66A2RUB6 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC66A2RUB6 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CCDC66A2RUB6 AC002056.1-201ENST00000395613 760 ntBASIC16.86■□□□□ 0.29
CCDC66A2RUB6 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
CCDC66A2RUB6 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
CCDC66A2RUB6 SMN2-210ENST00000511812 867 ntTSL 2 BASIC16.86■□□□□ 0.29
CCDC66A2RUB6 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC16.86■□□□□ 0.29
CCDC66A2RUB6 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC16.86■□□□□ 0.29
CCDC66A2RUB6 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms