Protein–RNA interactions for Protein: A0A1W2PPF3

DUXB, Double homeobox B, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUXBA0A1W2PPF3 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
DUXBA0A1W2PPF3 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
DUXBA0A1W2PPF3 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
DUXBA0A1W2PPF3 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
DUXBA0A1W2PPF3 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
DUXBA0A1W2PPF3 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
DUXBA0A1W2PPF3 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
DUXBA0A1W2PPF3 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC12.66□□□□□ -0.38
DUXBA0A1W2PPF3 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
DUXBA0A1W2PPF3 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
DUXBA0A1W2PPF3 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC12.66□□□□□ -0.38
DUXBA0A1W2PPF3 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC12.66□□□□□ -0.38
DUXBA0A1W2PPF3 MTHFR-210ENST00000641407 2387 ntBASIC12.66□□□□□ -0.38
DUXBA0A1W2PPF3 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
DUXBA0A1W2PPF3 AC018442.1-201ENST00000421439 2061 ntBASIC12.66□□□□□ -0.38
DUXBA0A1W2PPF3 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
DUXBA0A1W2PPF3 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC12.66□□□□□ -0.38
DUXBA0A1W2PPF3 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
DUXBA0A1W2PPF3 AC138969.3-201ENST00000546612 1459 ntBASIC12.66□□□□□ -0.38
DUXBA0A1W2PPF3 AC138932.2-201ENST00000548268 1459 ntBASIC12.66□□□□□ -0.38
DUXBA0A1W2PPF3 AC126755.4-201ENST00000549796 1459 ntBASIC12.66□□□□□ -0.38
DUXBA0A1W2PPF3 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
DUXBA0A1W2PPF3 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
DUXBA0A1W2PPF3 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
DUXBA0A1W2PPF3 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
DUXBA0A1W2PPF3 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
DUXBA0A1W2PPF3 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
DUXBA0A1W2PPF3 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
DUXBA0A1W2PPF3 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
DUXBA0A1W2PPF3 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
DUXBA0A1W2PPF3 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC12.66□□□□□ -0.38
DUXBA0A1W2PPF3 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
DUXBA0A1W2PPF3 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
DUXBA0A1W2PPF3 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
DUXBA0A1W2PPF3 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
DUXBA0A1W2PPF3 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
DUXBA0A1W2PPF3 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
DUXBA0A1W2PPF3 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
DUXBA0A1W2PPF3 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
DUXBA0A1W2PPF3 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
DUXBA0A1W2PPF3 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC12.66□□□□□ -0.38
DUXBA0A1W2PPF3 SMN2-210ENST00000511812 867 ntTSL 2 BASIC12.66□□□□□ -0.38
DUXBA0A1W2PPF3 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC12.66□□□□□ -0.38
DUXBA0A1W2PPF3 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC12.66□□□□□ -0.38
DUXBA0A1W2PPF3 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
DUXBA0A1W2PPF3 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
DUXBA0A1W2PPF3 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
DUXBA0A1W2PPF3 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
DUXBA0A1W2PPF3 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
DUXBA0A1W2PPF3 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC12.66□□□□□ -0.38
DUXBA0A1W2PPF3 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
DUXBA0A1W2PPF3 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC12.66□□□□□ -0.38
DUXBA0A1W2PPF3 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC12.66□□□□□ -0.38
DUXBA0A1W2PPF3 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
DUXBA0A1W2PPF3 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
DUXBA0A1W2PPF3 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
DUXBA0A1W2PPF3 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
DUXBA0A1W2PPF3 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
DUXBA0A1W2PPF3 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC12.66□□□□□ -0.38
DUXBA0A1W2PPF3 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
DUXBA0A1W2PPF3 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
DUXBA0A1W2PPF3 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
DUXBA0A1W2PPF3 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
DUXBA0A1W2PPF3 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
DUXBA0A1W2PPF3 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
DUXBA0A1W2PPF3 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
DUXBA0A1W2PPF3 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC12.65□□□□□ -0.38
DUXBA0A1W2PPF3 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
DUXBA0A1W2PPF3 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.38
DUXBA0A1W2PPF3 AC007787.1-201ENST00000588095 1583 ntBASIC12.65□□□□□ -0.38
DUXBA0A1W2PPF3 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC12.65□□□□□ -0.38
DUXBA0A1W2PPF3 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC12.65□□□□□ -0.38
DUXBA0A1W2PPF3 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
DUXBA0A1W2PPF3 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC12.65□□□□□ -0.38
DUXBA0A1W2PPF3 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
DUXBA0A1W2PPF3 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC12.65□□□□□ -0.38
DUXBA0A1W2PPF3 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
DUXBA0A1W2PPF3 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC12.65□□□□□ -0.38
DUXBA0A1W2PPF3 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
DUXBA0A1W2PPF3 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC12.65□□□□□ -0.38
DUXBA0A1W2PPF3 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
DUXBA0A1W2PPF3 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
DUXBA0A1W2PPF3 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
DUXBA0A1W2PPF3 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC12.65□□□□□ -0.38
DUXBA0A1W2PPF3 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
DUXBA0A1W2PPF3 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
DUXBA0A1W2PPF3 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
DUXBA0A1W2PPF3 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
DUXBA0A1W2PPF3 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
DUXBA0A1W2PPF3 AZGP1P1-201ENST00000411909 902 ntBASIC12.65□□□□□ -0.38
DUXBA0A1W2PPF3 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC12.65□□□□□ -0.38
DUXBA0A1W2PPF3 TPT1P11-201ENST00000458482 498 ntBASIC12.65□□□□□ -0.38
DUXBA0A1W2PPF3 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
DUXBA0A1W2PPF3 KRT18P35-201ENST00000510488 1269 ntBASIC12.65□□□□□ -0.38
DUXBA0A1W2PPF3 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
DUXBA0A1W2PPF3 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC12.65□□□□□ -0.38
DUXBA0A1W2PPF3 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC12.65□□□□□ -0.38
DUXBA0A1W2PPF3 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
DUXBA0A1W2PPF3 AC099522.2-201ENST00000607001 744 ntBASIC12.65□□□□□ -0.38
DUXBA0A1W2PPF3 AL773604.1-201ENST00000617417 272 ntBASIC12.65□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 57.2 ms