Protein–RNA interactions for Protein: Q9Y6M4

CSNK1G3, Casein kinase I isoform gamma-3, humanhuman

Predictions only

Length 447 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G3Q9Y6M4 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CSNK1G3Q9Y6M4 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
CSNK1G3Q9Y6M4 CASK-202ENST00000378158 3848 ntTSL 5 BASIC15.16■□□□□ 0.02
CSNK1G3Q9Y6M4 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
CSNK1G3Q9Y6M4 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC15.16■□□□□ 0.02
CSNK1G3Q9Y6M4 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC15.16■□□□□ 0.02
CSNK1G3Q9Y6M4 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
CSNK1G3Q9Y6M4 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
CSNK1G3Q9Y6M4 BANP-201ENST00000286122 2368 ntTSL 5 BASIC15.16■□□□□ 0.02
CSNK1G3Q9Y6M4 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CSNK1G3Q9Y6M4 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CSNK1G3Q9Y6M4 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC15.15■□□□□ 0.02
CSNK1G3Q9Y6M4 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC15.15■□□□□ 0.02
CSNK1G3Q9Y6M4 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC15.15■□□□□ 0.02
CSNK1G3Q9Y6M4 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CSNK1G3Q9Y6M4 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CSNK1G3Q9Y6M4 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CSNK1G3Q9Y6M4 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
CSNK1G3Q9Y6M4 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CSNK1G3Q9Y6M4 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CSNK1G3Q9Y6M4 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC15.15■□□□□ 0.02
CSNK1G3Q9Y6M4 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
CSNK1G3Q9Y6M4 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CSNK1G3Q9Y6M4 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
CSNK1G3Q9Y6M4 AMT-233ENST00000636522 1620 ntTSL 2 BASIC15.15■□□□□ 0.02
CSNK1G3Q9Y6M4 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
CSNK1G3Q9Y6M4 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC15.15■□□□□ 0.02
CSNK1G3Q9Y6M4 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CSNK1G3Q9Y6M4 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CSNK1G3Q9Y6M4 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CSNK1G3Q9Y6M4 GUK1-206ENST00000366723 845 ntTSL 5 BASIC15.15■□□□□ 0.02
CSNK1G3Q9Y6M4 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CSNK1G3Q9Y6M4 NUS1P3-201ENST00000423502 862 ntBASIC15.15■□□□□ 0.02
CSNK1G3Q9Y6M4 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CSNK1G3Q9Y6M4 AC026954.1-201ENST00000429771 1293 ntBASIC15.15■□□□□ 0.02
CSNK1G3Q9Y6M4 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC15.15■□□□□ 0.02
CSNK1G3Q9Y6M4 AHRR-211ENST00000515206 462 ntTSL 5 BASIC15.15■□□□□ 0.02
CSNK1G3Q9Y6M4 AGER-214ENST00000538695 487 ntTSL 2 BASIC15.15■□□□□ 0.02
CSNK1G3Q9Y6M4 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC15.15■□□□□ 0.02
CSNK1G3Q9Y6M4 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CSNK1G3Q9Y6M4 GPR39-203ENST00000622084 900 ntTSL 5 BASIC15.15■□□□□ 0.02
CSNK1G3Q9Y6M4 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CSNK1G3Q9Y6M4 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
CSNK1G3Q9Y6M4 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CSNK1G3Q9Y6M4 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CSNK1G3Q9Y6M4 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CSNK1G3Q9Y6M4 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
CSNK1G3Q9Y6M4 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CSNK1G3Q9Y6M4 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC15.15■□□□□ 0.02
CSNK1G3Q9Y6M4 PSMD8-209ENST00000602911 1330 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CSNK1G3Q9Y6M4 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
CSNK1G3Q9Y6M4 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
CSNK1G3Q9Y6M4 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
CSNK1G3Q9Y6M4 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC15.14■□□□□ 0.01
CSNK1G3Q9Y6M4 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC15.14■□□□□ 0.01
CSNK1G3Q9Y6M4 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CSNK1G3Q9Y6M4 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CSNK1G3Q9Y6M4 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
CSNK1G3Q9Y6M4 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CSNK1G3Q9Y6M4 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CSNK1G3Q9Y6M4 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
CSNK1G3Q9Y6M4 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC15.14■□□□□ 0.01
CSNK1G3Q9Y6M4 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CSNK1G3Q9Y6M4 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
CSNK1G3Q9Y6M4 AC006001.1-201ENST00000325130 474 ntBASIC15.14■□□□□ 0.01
CSNK1G3Q9Y6M4 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC15.14■□□□□ 0.01
CSNK1G3Q9Y6M4 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CSNK1G3Q9Y6M4 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
CSNK1G3Q9Y6M4 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
CSNK1G3Q9Y6M4 TPO-206ENST00000382269 1155 ntTSL 5 BASIC15.14■□□□□ 0.01
CSNK1G3Q9Y6M4 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC15.14■□□□□ 0.01
CSNK1G3Q9Y6M4 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC15.14■□□□□ 0.01
CSNK1G3Q9Y6M4 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC15.14■□□□□ 0.01
CSNK1G3Q9Y6M4 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC15.14■□□□□ 0.01
CSNK1G3Q9Y6M4 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC15.14■□□□□ 0.01
CSNK1G3Q9Y6M4 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC15.14■□□□□ 0.01
CSNK1G3Q9Y6M4 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
CSNK1G3Q9Y6M4 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC15.14■□□□□ 0.01
CSNK1G3Q9Y6M4 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CSNK1G3Q9Y6M4 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CSNK1G3Q9Y6M4 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CSNK1G3Q9Y6M4 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC15.14■□□□□ 0.01
CSNK1G3Q9Y6M4 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
CSNK1G3Q9Y6M4 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
CSNK1G3Q9Y6M4 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CSNK1G3Q9Y6M4 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC15.14■□□□□ 0.01
CSNK1G3Q9Y6M4 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CSNK1G3Q9Y6M4 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CSNK1G3Q9Y6M4 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC15.14■□□□□ 0.01
CSNK1G3Q9Y6M4 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
CSNK1G3Q9Y6M4 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
CSNK1G3Q9Y6M4 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
CSNK1G3Q9Y6M4 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC15.13■□□□□ 0.01
CSNK1G3Q9Y6M4 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CSNK1G3Q9Y6M4 AP003392.4-202ENST00000526453 1359 ntTSL 2 BASIC15.13■□□□□ 0.01
CSNK1G3Q9Y6M4 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
CSNK1G3Q9Y6M4 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
CSNK1G3Q9Y6M4 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
CSNK1G3Q9Y6M4 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
CSNK1G3Q9Y6M4 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms