Protein–RNA interactions for Protein: Q9Y5S2

CDC42BPB, Serine/threonine-protein kinase MRCK beta, humanhuman

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPBQ9Y5S2 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
CDC42BPBQ9Y5S2 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
CDC42BPBQ9Y5S2 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
CDC42BPBQ9Y5S2 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC22.72■■□□□ 1.23
CDC42BPBQ9Y5S2 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
CDC42BPBQ9Y5S2 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC22.72■■□□□ 1.23
CDC42BPBQ9Y5S2 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC22.71■■□□□ 1.23
CDC42BPBQ9Y5S2 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
CDC42BPBQ9Y5S2 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
CDC42BPBQ9Y5S2 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
CDC42BPBQ9Y5S2 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC22.71■■□□□ 1.23
CDC42BPBQ9Y5S2 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC22.71■■□□□ 1.23
CDC42BPBQ9Y5S2 MIR6756-201ENST00000616240 63 ntBASIC22.71■■□□□ 1.23
CDC42BPBQ9Y5S2 AC012508.2-201ENST00000567613 1472 ntBASIC22.71■■□□□ 1.23
CDC42BPBQ9Y5S2 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC22.71■■□□□ 1.23
CDC42BPBQ9Y5S2 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC22.71■■□□□ 1.23
CDC42BPBQ9Y5S2 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
CDC42BPBQ9Y5S2 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
CDC42BPBQ9Y5S2 AR-207ENST00000612010 3896 ntTSL 5 BASIC22.71■■□□□ 1.23
CDC42BPBQ9Y5S2 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
CDC42BPBQ9Y5S2 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
CDC42BPBQ9Y5S2 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC22.71■■□□□ 1.23
CDC42BPBQ9Y5S2 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
CDC42BPBQ9Y5S2 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC22.71■■□□□ 1.23
CDC42BPBQ9Y5S2 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC22.71■■□□□ 1.23
CDC42BPBQ9Y5S2 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC22.71■■□□□ 1.23
CDC42BPBQ9Y5S2 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC22.71■■□□□ 1.23
CDC42BPBQ9Y5S2 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
CDC42BPBQ9Y5S2 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
CDC42BPBQ9Y5S2 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
CDC42BPBQ9Y5S2 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC22.71■■□□□ 1.23
CDC42BPBQ9Y5S2 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC22.71■■□□□ 1.23
CDC42BPBQ9Y5S2 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC22.71■■□□□ 1.23
CDC42BPBQ9Y5S2 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
CDC42BPBQ9Y5S2 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC22.71■■□□□ 1.23
CDC42BPBQ9Y5S2 AC105362.1-201ENST00000511234 564 ntTSL 3 BASIC22.71■■□□□ 1.23
CDC42BPBQ9Y5S2 PTK2-225ENST00000520892 571 ntTSL 4 BASIC22.71■■□□□ 1.23
CDC42BPBQ9Y5S2 PHBP15-201ENST00000574228 665 ntBASIC22.71■■□□□ 1.23
CDC42BPBQ9Y5S2 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC22.71■■□□□ 1.23
CDC42BPBQ9Y5S2 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC22.71■■□□□ 1.23
CDC42BPBQ9Y5S2 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
CDC42BPBQ9Y5S2 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.23
CDC42BPBQ9Y5S2 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC22.7■■□□□ 1.23
CDC42BPBQ9Y5S2 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC22.7■■□□□ 1.23
CDC42BPBQ9Y5S2 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.23
CDC42BPBQ9Y5S2 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC22.7■■□□□ 1.23
CDC42BPBQ9Y5S2 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC22.7■■□□□ 1.23
CDC42BPBQ9Y5S2 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC22.7■■□□□ 1.23
CDC42BPBQ9Y5S2 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC22.7■■□□□ 1.22
CDC42BPBQ9Y5S2 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
CDC42BPBQ9Y5S2 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
CDC42BPBQ9Y5S2 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC22.7■■□□□ 1.22
CDC42BPBQ9Y5S2 AP000845.1-201ENST00000581677 2131 ntBASIC22.7■■□□□ 1.22
CDC42BPBQ9Y5S2 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
CDC42BPBQ9Y5S2 AL590440.2-201ENST00000641973 1595 ntBASIC22.7■■□□□ 1.22
CDC42BPBQ9Y5S2 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC22.7■■□□□ 1.22
CDC42BPBQ9Y5S2 AC239868.1-201ENST00000369385 493 ntBASIC22.7■■□□□ 1.22
CDC42BPBQ9Y5S2 OR2R1P-201ENST00000441404 914 ntBASIC22.7■■□□□ 1.22
CDC42BPBQ9Y5S2 AC073573.1-201ENST00000550908 481 ntTSL 3 BASIC22.7■■□□□ 1.22
CDC42BPBQ9Y5S2 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC22.7■■□□□ 1.22
CDC42BPBQ9Y5S2 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC22.7■■□□□ 1.22
CDC42BPBQ9Y5S2 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC22.7■■□□□ 1.22
CDC42BPBQ9Y5S2 MIR6842-201ENST00000612539 65 ntBASIC22.7■■□□□ 1.22
CDC42BPBQ9Y5S2 AP001065.2-201ENST00000617205 644 ntBASIC22.7■■□□□ 1.22
CDC42BPBQ9Y5S2 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC22.7■■□□□ 1.22
CDC42BPBQ9Y5S2 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
CDC42BPBQ9Y5S2 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC22.7■■□□□ 1.22
CDC42BPBQ9Y5S2 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC22.7■■□□□ 1.22
CDC42BPBQ9Y5S2 KRT8P31-201ENST00000504812 1408 ntBASIC22.7■■□□□ 1.22
CDC42BPBQ9Y5S2 AC074138.1-201ENST00000611182 1303 ntBASIC22.7■■□□□ 1.22
CDC42BPBQ9Y5S2 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC22.69■■□□□ 1.22
CDC42BPBQ9Y5S2 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
CDC42BPBQ9Y5S2 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC22.69■■□□□ 1.22
CDC42BPBQ9Y5S2 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC22.69■■□□□ 1.22
CDC42BPBQ9Y5S2 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
CDC42BPBQ9Y5S2 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
CDC42BPBQ9Y5S2 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
CDC42BPBQ9Y5S2 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC22.69■■□□□ 1.22
CDC42BPBQ9Y5S2 NCR3-202ENST00000376071 541 ntTSL 5 BASIC22.69■■□□□ 1.22
CDC42BPBQ9Y5S2 DNAJB1P1-201ENST00000429417 1024 ntBASIC22.69■■□□□ 1.22
CDC42BPBQ9Y5S2 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
CDC42BPBQ9Y5S2 AL049795.2-201ENST00000515055 667 ntTSL 2 BASIC22.69■■□□□ 1.22
CDC42BPBQ9Y5S2 VPS18-202ENST00000558474 873 ntTSL 3 BASIC22.69■■□□□ 1.22
CDC42BPBQ9Y5S2 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC22.69■■□□□ 1.22
CDC42BPBQ9Y5S2 AC005618.3-201ENST00000624928 458 ntBASIC22.69■■□□□ 1.22
CDC42BPBQ9Y5S2 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC22.69■■□□□ 1.22
CDC42BPBQ9Y5S2 FRMPD2B-201ENST00000431305 1347 ntBASIC22.69■■□□□ 1.22
CDC42BPBQ9Y5S2 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
CDC42BPBQ9Y5S2 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC22.68■■□□□ 1.22
CDC42BPBQ9Y5S2 ACYP1-201ENST00000238618 627 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CDC42BPBQ9Y5S2 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
CDC42BPBQ9Y5S2 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC22.68■■□□□ 1.22
CDC42BPBQ9Y5S2 AL137856.1-201ENST00000429398 773 ntTSL 3 BASIC22.68■■□□□ 1.22
CDC42BPBQ9Y5S2 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC22.68■■□□□ 1.22
CDC42BPBQ9Y5S2 AC005632.3-201ENST00000605544 308 ntBASIC22.68■■□□□ 1.22
CDC42BPBQ9Y5S2 HLA-C-210ENST00000640219 976 ntBASIC22.68■■□□□ 1.22
CDC42BPBQ9Y5S2 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC22.68■■□□□ 1.22
CDC42BPBQ9Y5S2 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC22.68■■□□□ 1.22
CDC42BPBQ9Y5S2 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CDC42BPBQ9Y5S2 AC015909.3-201ENST00000572855 1794 ntBASIC22.68■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 1077.4 ms