Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC14.29□□□□□ -0.12
RPH3AQ9Y2J0 FTH1-202ENST00000526640 786 ntTSL 2 BASIC14.29□□□□□ -0.12
RPH3AQ9Y2J0 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC14.29□□□□□ -0.12
RPH3AQ9Y2J0 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC14.29□□□□□ -0.12
RPH3AQ9Y2J0 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RPH3AQ9Y2J0 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RPH3AQ9Y2J0 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC14.29□□□□□ -0.12
RPH3AQ9Y2J0 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RPH3AQ9Y2J0 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RPH3AQ9Y2J0 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
RPH3AQ9Y2J0 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RPH3AQ9Y2J0 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RPH3AQ9Y2J0 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
RPH3AQ9Y2J0 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC14.29□□□□□ -0.12
RPH3AQ9Y2J0 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RPH3AQ9Y2J0 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
RPH3AQ9Y2J0 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RPH3AQ9Y2J0 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC14.29□□□□□ -0.12
RPH3AQ9Y2J0 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RPH3AQ9Y2J0 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
RPH3AQ9Y2J0 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC14.29□□□□□ -0.12
RPH3AQ9Y2J0 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RPH3AQ9Y2J0 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
RPH3AQ9Y2J0 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
RPH3AQ9Y2J0 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
RPH3AQ9Y2J0 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RPH3AQ9Y2J0 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RPH3AQ9Y2J0 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RPH3AQ9Y2J0 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
RPH3AQ9Y2J0 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
RPH3AQ9Y2J0 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
RPH3AQ9Y2J0 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RPH3AQ9Y2J0 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RPH3AQ9Y2J0 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
RPH3AQ9Y2J0 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC14.28□□□□□ -0.12
RPH3AQ9Y2J0 DBET-201ENST00000630918 3363 ntBASIC14.28□□□□□ -0.12
RPH3AQ9Y2J0 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RPH3AQ9Y2J0 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
RPH3AQ9Y2J0 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RPH3AQ9Y2J0 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RPH3AQ9Y2J0 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RPH3AQ9Y2J0 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
RPH3AQ9Y2J0 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
RPH3AQ9Y2J0 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RPH3AQ9Y2J0 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC14.28□□□□□ -0.12
RPH3AQ9Y2J0 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC14.28□□□□□ -0.12
RPH3AQ9Y2J0 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RPH3AQ9Y2J0 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RPH3AQ9Y2J0 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
RPH3AQ9Y2J0 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
RPH3AQ9Y2J0 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RPH3AQ9Y2J0 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RPH3AQ9Y2J0 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
RPH3AQ9Y2J0 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC14.28□□□□□ -0.12
RPH3AQ9Y2J0 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RPH3AQ9Y2J0 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
RPH3AQ9Y2J0 AC093004.1-201ENST00000508850 424 ntBASIC14.28□□□□□ -0.12
RPH3AQ9Y2J0 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC14.28□□□□□ -0.12
RPH3AQ9Y2J0 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
RPH3AQ9Y2J0 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC14.28□□□□□ -0.12
RPH3AQ9Y2J0 IGHV3-71-201ENST00000523324 359 ntBASIC14.28□□□□□ -0.12
RPH3AQ9Y2J0 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RPH3AQ9Y2J0 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RPH3AQ9Y2J0 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RPH3AQ9Y2J0 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC14.28□□□□□ -0.12
RPH3AQ9Y2J0 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
RPH3AQ9Y2J0 AC092337.1-201ENST00000568699 1129 ntBASIC14.28□□□□□ -0.12
RPH3AQ9Y2J0 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC14.28□□□□□ -0.12
RPH3AQ9Y2J0 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC14.28□□□□□ -0.12
RPH3AQ9Y2J0 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
RPH3AQ9Y2J0 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RPH3AQ9Y2J0 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
RPH3AQ9Y2J0 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
RPH3AQ9Y2J0 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RPH3AQ9Y2J0 CICP14-201ENST00000629111 2732 ntBASIC14.28□□□□□ -0.12
RPH3AQ9Y2J0 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
RPH3AQ9Y2J0 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RPH3AQ9Y2J0 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
RPH3AQ9Y2J0 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
RPH3AQ9Y2J0 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RPH3AQ9Y2J0 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
RPH3AQ9Y2J0 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RPH3AQ9Y2J0 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC14.28□□□□□ -0.12
RPH3AQ9Y2J0 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RPH3AQ9Y2J0 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
RPH3AQ9Y2J0 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC14.27□□□□□ -0.12
RPH3AQ9Y2J0 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RPH3AQ9Y2J0 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC14.27□□□□□ -0.12
RPH3AQ9Y2J0 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
RPH3AQ9Y2J0 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RPH3AQ9Y2J0 DKFZP434H168-201ENST00000567381 1905 ntBASIC14.27□□□□□ -0.12
RPH3AQ9Y2J0 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RPH3AQ9Y2J0 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
RPH3AQ9Y2J0 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RPH3AQ9Y2J0 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
RPH3AQ9Y2J0 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RPH3AQ9Y2J0 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC14.27□□□□□ -0.12
RPH3AQ9Y2J0 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC14.27□□□□□ -0.12
RPH3AQ9Y2J0 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
RPH3AQ9Y2J0 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms