Protein–RNA interactions for Protein: Q9P035

HACD3, Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3Q9P035 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
HACD3Q9P035 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC15.72■□□□□ 0.11
HACD3Q9P035 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
HACD3Q9P035 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
HACD3Q9P035 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HACD3Q9P035 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HACD3Q9P035 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC15.72■□□□□ 0.11
HACD3Q9P035 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC15.72■□□□□ 0.11
HACD3Q9P035 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
HACD3Q9P035 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HACD3Q9P035 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HACD3Q9P035 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HACD3Q9P035 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
HACD3Q9P035 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
HACD3Q9P035 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
HACD3Q9P035 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HACD3Q9P035 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
HACD3Q9P035 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
HACD3Q9P035 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
HACD3Q9P035 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
HACD3Q9P035 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
HACD3Q9P035 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC15.71■□□□□ 0.11
HACD3Q9P035 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
HACD3Q9P035 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HACD3Q9P035 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC15.71■□□□□ 0.11
HACD3Q9P035 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC15.71■□□□□ 0.11
HACD3Q9P035 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC15.71■□□□□ 0.11
HACD3Q9P035 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
HACD3Q9P035 MROH1-207ENST00000528919 5234 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
HACD3Q9P035 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC15.71■□□□□ 0.11
HACD3Q9P035 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC15.71■□□□□ 0.11
HACD3Q9P035 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC15.71■□□□□ 0.11
HACD3Q9P035 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HACD3Q9P035 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
HACD3Q9P035 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HACD3Q9P035 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC15.71■□□□□ 0.11
HACD3Q9P035 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC15.71■□□□□ 0.11
HACD3Q9P035 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
HACD3Q9P035 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC15.71■□□□□ 0.11
HACD3Q9P035 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC15.71■□□□□ 0.11
HACD3Q9P035 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC15.71■□□□□ 0.11
HACD3Q9P035 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC15.71■□□□□ 0.11
HACD3Q9P035 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
HACD3Q9P035 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
HACD3Q9P035 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC15.71■□□□□ 0.11
HACD3Q9P035 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
HACD3Q9P035 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC15.71■□□□□ 0.11
HACD3Q9P035 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC15.71■□□□□ 0.11
HACD3Q9P035 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC15.71■□□□□ 0.11
HACD3Q9P035 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC15.71■□□□□ 0.11
HACD3Q9P035 SRD5A3P1-201ENST00000603021 949 ntBASIC15.71■□□□□ 0.11
HACD3Q9P035 AC004840.1-201ENST00000636359 365 ntBASIC15.71■□□□□ 0.11
HACD3Q9P035 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HACD3Q9P035 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HACD3Q9P035 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HACD3Q9P035 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HACD3Q9P035 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HACD3Q9P035 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
HACD3Q9P035 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
HACD3Q9P035 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
HACD3Q9P035 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
HACD3Q9P035 LCK-206ENST00000373564 2137 ntTSL 5 BASIC15.71■□□□□ 0.11
HACD3Q9P035 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.11
HACD3Q9P035 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
HACD3Q9P035 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.11
HACD3Q9P035 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
HACD3Q9P035 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
HACD3Q9P035 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC15.7■□□□□ 0.1
HACD3Q9P035 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HACD3Q9P035 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC15.7■□□□□ 0.1
HACD3Q9P035 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC15.7■□□□□ 0.1
HACD3Q9P035 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC15.7■□□□□ 0.1
HACD3Q9P035 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
HACD3Q9P035 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
HACD3Q9P035 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
HACD3Q9P035 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
HACD3Q9P035 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
HACD3Q9P035 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
HACD3Q9P035 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
HACD3Q9P035 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HACD3Q9P035 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
HACD3Q9P035 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC15.7■□□□□ 0.1
HACD3Q9P035 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HACD3Q9P035 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC15.7■□□□□ 0.1
HACD3Q9P035 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
HACD3Q9P035 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC15.7■□□□□ 0.1
HACD3Q9P035 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
HACD3Q9P035 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
HACD3Q9P035 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC15.7■□□□□ 0.1
HACD3Q9P035 RASL12-203ENST00000434605 982 ntTSL 2 BASIC15.7■□□□□ 0.1
HACD3Q9P035 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC15.7■□□□□ 0.1
HACD3Q9P035 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HACD3Q9P035 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC15.7■□□□□ 0.1
HACD3Q9P035 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC15.7■□□□□ 0.1
HACD3Q9P035 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HACD3Q9P035 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC15.7■□□□□ 0.1
HACD3Q9P035 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
HACD3Q9P035 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
HACD3Q9P035 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
HACD3Q9P035 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms