Protein–RNA interactions for Protein: Q96S86

HAPLN3, Hyaluronan and proteoglycan link protein 3, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HAPLN3Q96S86 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC16.02■□□□□ 0.15
HAPLN3Q96S86 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC16.01■□□□□ 0.15
HAPLN3Q96S86 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
HAPLN3Q96S86 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
HAPLN3Q96S86 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC16.01■□□□□ 0.15
HAPLN3Q96S86 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
HAPLN3Q96S86 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
HAPLN3Q96S86 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HAPLN3Q96S86 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
HAPLN3Q96S86 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HAPLN3Q96S86 AC013268.4-201ENST00000637413 2228 ntBASIC16.01■□□□□ 0.15
HAPLN3Q96S86 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
HAPLN3Q96S86 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
HAPLN3Q96S86 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HAPLN3Q96S86 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
HAPLN3Q96S86 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
HAPLN3Q96S86 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC16.01■□□□□ 0.15
HAPLN3Q96S86 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC16.01■□□□□ 0.15
HAPLN3Q96S86 AC104457.1-201ENST00000401024 814 ntBASIC16.01■□□□□ 0.15
HAPLN3Q96S86 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
HAPLN3Q96S86 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC16.01■□□□□ 0.15
HAPLN3Q96S86 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC16.01■□□□□ 0.15
HAPLN3Q96S86 GALT-202ENST00000450095 1280 ntTSL 2 BASIC16.01■□□□□ 0.15
HAPLN3Q96S86 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
HAPLN3Q96S86 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
HAPLN3Q96S86 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC16.01■□□□□ 0.15
HAPLN3Q96S86 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC16.01■□□□□ 0.15
HAPLN3Q96S86 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
HAPLN3Q96S86 AC120045.2-201ENST00000567334 178 ntBASIC16.01■□□□□ 0.15
HAPLN3Q96S86 AC239800.4-201ENST00000603712 296 ntBASIC16.01■□□□□ 0.15
HAPLN3Q96S86 AC133539.2-201ENST00000604757 467 ntBASIC16.01■□□□□ 0.15
HAPLN3Q96S86 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC16.01■□□□□ 0.15
HAPLN3Q96S86 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC16.01■□□□□ 0.15
HAPLN3Q96S86 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
HAPLN3Q96S86 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC16.01■□□□□ 0.15
HAPLN3Q96S86 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC16.01■□□□□ 0.15
HAPLN3Q96S86 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HAPLN3Q96S86 AC073347.1-201ENST00000421633 2643 ntBASIC16.01■□□□□ 0.15
HAPLN3Q96S86 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
HAPLN3Q96S86 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HAPLN3Q96S86 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
HAPLN3Q96S86 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
HAPLN3Q96S86 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC16.01■□□□□ 0.15
HAPLN3Q96S86 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HAPLN3Q96S86 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
HAPLN3Q96S86 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
HAPLN3Q96S86 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
HAPLN3Q96S86 OVCH1-AS1-204ENST00000641955 5529 ntBASIC16.01■□□□□ 0.15
HAPLN3Q96S86 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
HAPLN3Q96S86 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
HAPLN3Q96S86 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
HAPLN3Q96S86 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
HAPLN3Q96S86 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
HAPLN3Q96S86 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC16■□□□□ 0.15
HAPLN3Q96S86 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC16■□□□□ 0.15
HAPLN3Q96S86 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC16■□□□□ 0.15
HAPLN3Q96S86 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC16■□□□□ 0.15
HAPLN3Q96S86 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
HAPLN3Q96S86 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
HAPLN3Q96S86 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC16■□□□□ 0.15
HAPLN3Q96S86 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
HAPLN3Q96S86 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC16■□□□□ 0.15
HAPLN3Q96S86 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC16■□□□□ 0.15
HAPLN3Q96S86 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC16■□□□□ 0.15
HAPLN3Q96S86 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC16■□□□□ 0.15
HAPLN3Q96S86 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
HAPLN3Q96S86 DGCR5-201ENST00000399539 862 ntBASIC16■□□□□ 0.15
HAPLN3Q96S86 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC16■□□□□ 0.15
HAPLN3Q96S86 GHSR-202ENST00000427970 912 ntBASIC16■□□□□ 0.15
HAPLN3Q96S86 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC16■□□□□ 0.15
HAPLN3Q96S86 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC16■□□□□ 0.15
HAPLN3Q96S86 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC16■□□□□ 0.15
HAPLN3Q96S86 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC16■□□□□ 0.15
HAPLN3Q96S86 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC16■□□□□ 0.15
HAPLN3Q96S86 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC16■□□□□ 0.15
HAPLN3Q96S86 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC16■□□□□ 0.15
HAPLN3Q96S86 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC16■□□□□ 0.15
HAPLN3Q96S86 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC16■□□□□ 0.15
HAPLN3Q96S86 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC16■□□□□ 0.15
HAPLN3Q96S86 AC107373.2-201ENST00000607735 490 ntBASIC16■□□□□ 0.15
HAPLN3Q96S86 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC16■□□□□ 0.15
HAPLN3Q96S86 AC025048.6-201ENST00000634326 1161 ntBASIC16■□□□□ 0.15
HAPLN3Q96S86 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC16■□□□□ 0.15
HAPLN3Q96S86 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
HAPLN3Q96S86 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
HAPLN3Q96S86 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
HAPLN3Q96S86 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC16■□□□□ 0.15
HAPLN3Q96S86 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC16■□□□□ 0.15
HAPLN3Q96S86 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
HAPLN3Q96S86 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
HAPLN3Q96S86 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC16■□□□□ 0.15
HAPLN3Q96S86 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
HAPLN3Q96S86 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC16■□□□□ 0.15
HAPLN3Q96S86 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
HAPLN3Q96S86 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC16■□□□□ 0.15
HAPLN3Q96S86 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
HAPLN3Q96S86 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC16■□□□□ 0.15
HAPLN3Q96S86 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC16■□□□□ 0.15
HAPLN3Q96S86 HNRNPA1P48-201ENST00000562726 1377 ntBASIC16■□□□□ 0.15
HAPLN3Q96S86 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms