Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
NR1H4Q96RI1 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
NR1H4Q96RI1 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
NR1H4Q96RI1 LPO-201ENST00000262290 2979 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
NR1H4Q96RI1 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
NR1H4Q96RI1 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC14.64□□□□□ -0.07
NR1H4Q96RI1 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC14.64□□□□□ -0.07
NR1H4Q96RI1 TSSC2-201ENST00000450217 709 ntBASIC14.64□□□□□ -0.07
NR1H4Q96RI1 FAM86EP-206ENST00000510506 987 ntBASIC14.64□□□□□ -0.07
NR1H4Q96RI1 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC14.64□□□□□ -0.07
NR1H4Q96RI1 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC14.64□□□□□ -0.07
NR1H4Q96RI1 MIR4313-201ENST00000580760 101 ntBASIC14.64□□□□□ -0.07
NR1H4Q96RI1 AP005901.3-202ENST00000581653 237 ntBASIC14.64□□□□□ -0.07
NR1H4Q96RI1 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
NR1H4Q96RI1 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC14.64□□□□□ -0.07
NR1H4Q96RI1 APBB1-201ENST00000299402 2636 ntAPPRIS P3 TSL 5 BASIC14.64□□□□□ -0.07
NR1H4Q96RI1 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
NR1H4Q96RI1 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
NR1H4Q96RI1 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
NR1H4Q96RI1 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
NR1H4Q96RI1 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
NR1H4Q96RI1 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC14.64□□□□□ -0.07
NR1H4Q96RI1 DRD2-201ENST00000346454 2433 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
NR1H4Q96RI1 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
NR1H4Q96RI1 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
NR1H4Q96RI1 RILPL1-202ENST00000376874 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
NR1H4Q96RI1 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
NR1H4Q96RI1 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC14.64□□□□□ -0.07
NR1H4Q96RI1 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
NR1H4Q96RI1 CD99L2-205ENST00000437787 3493 ntTSL 2 BASIC14.64□□□□□ -0.07
NR1H4Q96RI1 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
NR1H4Q96RI1 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
NR1H4Q96RI1 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
NR1H4Q96RI1 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NR1H4Q96RI1 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NR1H4Q96RI1 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
NR1H4Q96RI1 OS9-201ENST00000257966 2505 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
NR1H4Q96RI1 AMT-224ENST00000635808 1610 ntTSL 5 BASIC14.63□□□□□ -0.07
NR1H4Q96RI1 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
NR1H4Q96RI1 AC233702.3-201ENST00000578656 1387 ntBASIC14.63□□□□□ -0.07
NR1H4Q96RI1 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
NR1H4Q96RI1 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NR1H4Q96RI1 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
NR1H4Q96RI1 MANBA-202ENST00000505239 2577 ntTSL 2 BASIC14.63□□□□□ -0.07
NR1H4Q96RI1 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
NR1H4Q96RI1 EGR2-201ENST00000242480 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NR1H4Q96RI1 PDE1C-205ENST00000396191 2952 ntAPPRIS ALT1 TSL 2 BASIC14.63□□□□□ -0.07
NR1H4Q96RI1 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
NR1H4Q96RI1 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
NR1H4Q96RI1 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NR1H4Q96RI1 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NR1H4Q96RI1 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC14.63□□□□□ -0.07
NR1H4Q96RI1 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC14.63□□□□□ -0.07
NR1H4Q96RI1 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC14.63□□□□□ -0.07
NR1H4Q96RI1 AC096582.2-201ENST00000510860 516 ntBASIC14.63□□□□□ -0.07
NR1H4Q96RI1 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC14.63□□□□□ -0.07
NR1H4Q96RI1 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC14.63□□□□□ -0.07
NR1H4Q96RI1 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC14.63□□□□□ -0.07
NR1H4Q96RI1 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC14.63□□□□□ -0.07
NR1H4Q96RI1 Z69720.1-201ENST00000601483 472 ntBASIC14.63□□□□□ -0.07
NR1H4Q96RI1 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC14.63□□□□□ -0.07
NR1H4Q96RI1 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NR1H4Q96RI1 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
NR1H4Q96RI1 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
NR1H4Q96RI1 AC068075.1-201ENST00000519714 1832 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
NR1H4Q96RI1 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
NR1H4Q96RI1 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC14.63□□□□□ -0.07
NR1H4Q96RI1 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
NR1H4Q96RI1 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC14.63□□□□□ -0.07
NR1H4Q96RI1 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
NR1H4Q96RI1 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC14.63□□□□□ -0.07
NR1H4Q96RI1 RPS6KA2-204ENST00000481261 2297 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
NR1H4Q96RI1 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC14.63□□□□□ -0.07
NR1H4Q96RI1 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
NR1H4Q96RI1 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NR1H4Q96RI1 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NR1H4Q96RI1 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NR1H4Q96RI1 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
NR1H4Q96RI1 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
NR1H4Q96RI1 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NR1H4Q96RI1 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC14.63□□□□□ -0.07
NR1H4Q96RI1 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
NR1H4Q96RI1 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NR1H4Q96RI1 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC14.62□□□□□ -0.07
NR1H4Q96RI1 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC14.62□□□□□ -0.07
NR1H4Q96RI1 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC14.62□□□□□ -0.07
NR1H4Q96RI1 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
NR1H4Q96RI1 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NR1H4Q96RI1 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
NR1H4Q96RI1 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NR1H4Q96RI1 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
NR1H4Q96RI1 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NR1H4Q96RI1 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NR1H4Q96RI1 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
NR1H4Q96RI1 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NR1H4Q96RI1 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC14.62□□□□□ -0.07
NR1H4Q96RI1 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
NR1H4Q96RI1 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
NR1H4Q96RI1 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
NR1H4Q96RI1 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC14.62□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 53.2 ms