Protein–RNA interactions for Protein: Q96EP0

RNF31, E3 ubiquitin-protein ligase RNF31, humanhuman

Predictions only

Length 1,072 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF31Q96EP0 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
RNF31Q96EP0 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
RNF31Q96EP0 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC15□□□□□ -0.01
RNF31Q96EP0 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC15□□□□□ -0.01
RNF31Q96EP0 AC018665.1-201ENST00000622927 1362 ntBASIC15□□□□□ -0.01
RNF31Q96EP0 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
RNF31Q96EP0 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC15□□□□□ -0.01
RNF31Q96EP0 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RNF31Q96EP0 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RNF31Q96EP0 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RNF31Q96EP0 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RNF31Q96EP0 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC15□□□□□ -0.01
RNF31Q96EP0 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
RNF31Q96EP0 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC15□□□□□ -0.01
RNF31Q96EP0 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RNF31Q96EP0 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RNF31Q96EP0 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC15□□□□□ -0.01
RNF31Q96EP0 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC15□□□□□ -0.01
RNF31Q96EP0 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC15□□□□□ -0.01
RNF31Q96EP0 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC15□□□□□ -0.01
RNF31Q96EP0 AC007389.4-201ENST00000454674 793 ntBASIC15□□□□□ -0.01
RNF31Q96EP0 VDAC1P7-201ENST00000462417 847 ntBASIC15□□□□□ -0.01
RNF31Q96EP0 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC15□□□□□ -0.01
RNF31Q96EP0 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
RNF31Q96EP0 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC15□□□□□ -0.01
RNF31Q96EP0 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC15□□□□□ -0.01
RNF31Q96EP0 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC15□□□□□ -0.01
RNF31Q96EP0 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC15□□□□□ -0.01
RNF31Q96EP0 TDH-203ENST00000531764 1110 ntBASIC15□□□□□ -0.01
RNF31Q96EP0 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC15□□□□□ -0.01
RNF31Q96EP0 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC15□□□□□ -0.01
RNF31Q96EP0 HNRNPUP1-201ENST00000554987 333 ntBASIC15□□□□□ -0.01
RNF31Q96EP0 ORC6-206ENST00000568364 888 ntTSL 5 BASIC15□□□□□ -0.01
RNF31Q96EP0 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
RNF31Q96EP0 TMEM261P1-201ENST00000604899 340 ntBASIC15□□□□□ -0.01
RNF31Q96EP0 Six3os1_5.1-201ENST00000611000 271 ntBASIC15□□□□□ -0.01
RNF31Q96EP0 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC15□□□□□ -0.01
RNF31Q96EP0 MIR6805-201ENST00000615055 62 ntBASIC15□□□□□ -0.01
RNF31Q96EP0 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC15□□□□□ -0.01
RNF31Q96EP0 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC15□□□□□ -0.01
RNF31Q96EP0 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RNF31Q96EP0 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
RNF31Q96EP0 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RNF31Q96EP0 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
RNF31Q96EP0 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
RNF31Q96EP0 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
RNF31Q96EP0 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RNF31Q96EP0 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC15□□□□□ -0.01
RNF31Q96EP0 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC15□□□□□ -0.01
RNF31Q96EP0 AP002414.2-201ENST00000591780 3365 ntBASIC15□□□□□ -0.01
RNF31Q96EP0 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC15□□□□□ -0.01
RNF31Q96EP0 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
RNF31Q96EP0 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RNF31Q96EP0 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RNF31Q96EP0 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC15□□□□□ -0.01
RNF31Q96EP0 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
RNF31Q96EP0 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
RNF31Q96EP0 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC15□□□□□ -0.01
RNF31Q96EP0 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
RNF31Q96EP0 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
RNF31Q96EP0 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
RNF31Q96EP0 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
RNF31Q96EP0 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
RNF31Q96EP0 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RNF31Q96EP0 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RNF31Q96EP0 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC14.99□□□□□ -0.01
RNF31Q96EP0 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC14.99□□□□□ -0.01
RNF31Q96EP0 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
RNF31Q96EP0 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
RNF31Q96EP0 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
RNF31Q96EP0 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
RNF31Q96EP0 AC010491.1-201ENST00000563101 2797 ntBASIC14.99□□□□□ -0.01
RNF31Q96EP0 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
RNF31Q96EP0 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC14.99□□□□□ -0.01
RNF31Q96EP0 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
RNF31Q96EP0 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RNF31Q96EP0 AL596087.1-201ENST00000400979 1969 ntBASIC14.99□□□□□ -0.01
RNF31Q96EP0 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC14.99□□□□□ -0.01
RNF31Q96EP0 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
RNF31Q96EP0 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RNF31Q96EP0 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
RNF31Q96EP0 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC14.99□□□□□ -0.01
RNF31Q96EP0 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
RNF31Q96EP0 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC14.99□□□□□ -0.01
RNF31Q96EP0 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
RNF31Q96EP0 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
RNF31Q96EP0 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
RNF31Q96EP0 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC14.99□□□□□ -0.01
RNF31Q96EP0 PHKG1P2-201ENST00000457537 863 ntBASIC14.99□□□□□ -0.01
RNF31Q96EP0 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
RNF31Q96EP0 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC14.99□□□□□ -0.01
RNF31Q96EP0 NEU3-203ENST00000529024 581 ntTSL 3 BASIC14.99□□□□□ -0.01
RNF31Q96EP0 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC14.99□□□□□ -0.01
RNF31Q96EP0 PIGL-212ENST00000581006 554 ntTSL 4 BASIC14.99□□□□□ -0.01
RNF31Q96EP0 AL450472.2-201ENST00000603663 1156 ntBASIC14.99□□□□□ -0.01
RNF31Q96EP0 AL391069.4-201ENST00000609583 481 ntBASIC14.99□□□□□ -0.01
RNF31Q96EP0 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC14.99□□□□□ -0.01
RNF31Q96EP0 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC14.99□□□□□ -0.01
RNF31Q96EP0 SERF2-217ENST00000630046 862 ntTSL 5 BASIC14.99□□□□□ -0.01
RNF31Q96EP0 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC14.99□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms