Protein–RNA interactions for Protein: Q96BP2

CHCHD1, Coiled-coil-helix-coiled-coil-helix domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD1Q96BP2 ZBTB45P2-201ENST00000452245 1531 ntBASIC11.3□□□□□ -0.6
CHCHD1Q96BP2 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC11.29□□□□□ -0.6
CHCHD1Q96BP2 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
CHCHD1Q96BP2 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
CHCHD1Q96BP2 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
CHCHD1Q96BP2 KIF3A-201ENST00000378735 3266 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
CHCHD1Q96BP2 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
CHCHD1Q96BP2 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
CHCHD1Q96BP2 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
CHCHD1Q96BP2 LDLRAD4-203ENST00000399848 8633 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
CHCHD1Q96BP2 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC11.29□□□□□ -0.6
CHCHD1Q96BP2 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC11.29□□□□□ -0.6
CHCHD1Q96BP2 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
CHCHD1Q96BP2 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
CHCHD1Q96BP2 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
CHCHD1Q96BP2 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
CHCHD1Q96BP2 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC11.29□□□□□ -0.6
CHCHD1Q96BP2 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
CHCHD1Q96BP2 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
CHCHD1Q96BP2 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC11.29□□□□□ -0.6
CHCHD1Q96BP2 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC11.29□□□□□ -0.6
CHCHD1Q96BP2 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
CHCHD1Q96BP2 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC11.29□□□□□ -0.6
CHCHD1Q96BP2 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
CHCHD1Q96BP2 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
CHCHD1Q96BP2 TSPY22P-201ENST00000427496 604 ntBASIC11.29□□□□□ -0.6
CHCHD1Q96BP2 TSPY7P-201ENST00000431358 1114 ntBASIC11.29□□□□□ -0.6
CHCHD1Q96BP2 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
CHCHD1Q96BP2 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
CHCHD1Q96BP2 MTRF1LP2-201ENST00000506027 1122 ntBASIC11.29□□□□□ -0.6
CHCHD1Q96BP2 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC11.29□□□□□ -0.6
CHCHD1Q96BP2 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC11.29□□□□□ -0.6
CHCHD1Q96BP2 ABR-204ENST00000543210 1049 ntTSL 2 BASIC11.29□□□□□ -0.6
CHCHD1Q96BP2 ABR-217ENST00000572441 563 ntTSL 4 BASIC11.29□□□□□ -0.6
CHCHD1Q96BP2 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC11.29□□□□□ -0.6
CHCHD1Q96BP2 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
CHCHD1Q96BP2 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC11.29□□□□□ -0.6
CHCHD1Q96BP2 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
CHCHD1Q96BP2 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
CHCHD1Q96BP2 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC11.29□□□□□ -0.6
CHCHD1Q96BP2 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC11.29□□□□□ -0.6
CHCHD1Q96BP2 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC11.29□□□□□ -0.6
CHCHD1Q96BP2 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
CHCHD1Q96BP2 DYRK1B-202ENST00000348817 2448 ntTSL 5 BASIC11.29□□□□□ -0.6
CHCHD1Q96BP2 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC11.29□□□□□ -0.6
CHCHD1Q96BP2 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
CHCHD1Q96BP2 SLC4A7-214ENST00000455077 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
CHCHD1Q96BP2 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC11.29□□□□□ -0.6
CHCHD1Q96BP2 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC11.29□□□□□ -0.6
CHCHD1Q96BP2 AC129492.6-201ENST00000611383 1305 ntBASIC11.29□□□□□ -0.6
CHCHD1Q96BP2 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC11.29□□□□□ -0.6
CHCHD1Q96BP2 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC11.29□□□□□ -0.6
CHCHD1Q96BP2 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC11.29□□□□□ -0.6
CHCHD1Q96BP2 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
CHCHD1Q96BP2 PI4KAP1-204ENST00000612579 1703 ntBASIC11.29□□□□□ -0.6
CHCHD1Q96BP2 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC11.29□□□□□ -0.6
CHCHD1Q96BP2 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
CHCHD1Q96BP2 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC11.29□□□□□ -0.6
CHCHD1Q96BP2 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
CHCHD1Q96BP2 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC11.29□□□□□ -0.6
CHCHD1Q96BP2 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
CHCHD1Q96BP2 SPAST-201ENST00000315285 5117 ntAPPRIS P4 TSL 1 (best) BASIC11.28□□□□□ -0.6
CHCHD1Q96BP2 POU2F2-202ENST00000389341 6901 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
CHCHD1Q96BP2 INVS-201ENST00000262456 2968 ntTSL 5 BASIC11.28□□□□□ -0.6
CHCHD1Q96BP2 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC11.28□□□□□ -0.6
CHCHD1Q96BP2 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
CHCHD1Q96BP2 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
CHCHD1Q96BP2 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
CHCHD1Q96BP2 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CHCHD1Q96BP2 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
CHCHD1Q96BP2 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CHCHD1Q96BP2 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
CHCHD1Q96BP2 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CHCHD1Q96BP2 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CHCHD1Q96BP2 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
CHCHD1Q96BP2 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
CHCHD1Q96BP2 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
CHCHD1Q96BP2 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
CHCHD1Q96BP2 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC11.28□□□□□ -0.6
CHCHD1Q96BP2 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC11.28□□□□□ -0.6
CHCHD1Q96BP2 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CHCHD1Q96BP2 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
CHCHD1Q96BP2 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
CHCHD1Q96BP2 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CHCHD1Q96BP2 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC11.28□□□□□ -0.6
CHCHD1Q96BP2 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC11.28□□□□□ -0.6
CHCHD1Q96BP2 PATL2-207ENST00000560775 1913 ntAPPRIS P3 TSL 5 BASIC11.28□□□□□ -0.6
CHCHD1Q96BP2 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC11.28□□□□□ -0.6
CHCHD1Q96BP2 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC11.28□□□□□ -0.6
CHCHD1Q96BP2 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CHCHD1Q96BP2 AC083964.2-201ENST00000623988 2396 ntBASIC11.28□□□□□ -0.6
CHCHD1Q96BP2 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CHCHD1Q96BP2 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
CHCHD1Q96BP2 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CHCHD1Q96BP2 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC11.28□□□□□ -0.6
CHCHD1Q96BP2 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
CHCHD1Q96BP2 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
CHCHD1Q96BP2 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CHCHD1Q96BP2 GP6-202ENST00000333884 2210 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
CHCHD1Q96BP2 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms