Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
SMARCC2Q8TAQ2 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC18.12■□□□□ 0.49
SMARCC2Q8TAQ2 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC18.12■□□□□ 0.49
SMARCC2Q8TAQ2 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC18.12■□□□□ 0.49
SMARCC2Q8TAQ2 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC18.12■□□□□ 0.49
SMARCC2Q8TAQ2 AC140912.1-201ENST00000577171 1054 ntBASIC18.12■□□□□ 0.49
SMARCC2Q8TAQ2 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC18.12■□□□□ 0.49
SMARCC2Q8TAQ2 TBCB-211ENST00000589996 724 ntTSL 3 BASIC18.12■□□□□ 0.49
SMARCC2Q8TAQ2 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
SMARCC2Q8TAQ2 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SMARCC2Q8TAQ2 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC18.12■□□□□ 0.49
SMARCC2Q8TAQ2 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SMARCC2Q8TAQ2 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
SMARCC2Q8TAQ2 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC18.12■□□□□ 0.49
SMARCC2Q8TAQ2 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SMARCC2Q8TAQ2 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
SMARCC2Q8TAQ2 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
SMARCC2Q8TAQ2 MGMT-201ENST00000306010 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SMARCC2Q8TAQ2 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SMARCC2Q8TAQ2 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC18.11■□□□□ 0.49
SMARCC2Q8TAQ2 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
SMARCC2Q8TAQ2 AC013726.1-201ENST00000563747 2285 ntBASIC18.11■□□□□ 0.49
SMARCC2Q8TAQ2 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SMARCC2Q8TAQ2 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SMARCC2Q8TAQ2 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
SMARCC2Q8TAQ2 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
SMARCC2Q8TAQ2 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
SMARCC2Q8TAQ2 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SMARCC2Q8TAQ2 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SMARCC2Q8TAQ2 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SMARCC2Q8TAQ2 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
SMARCC2Q8TAQ2 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SMARCC2Q8TAQ2 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SMARCC2Q8TAQ2 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SMARCC2Q8TAQ2 EDF1-203ENST00000371649 790 ntTSL 2 BASIC18.11■□□□□ 0.49
SMARCC2Q8TAQ2 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC18.11■□□□□ 0.49
SMARCC2Q8TAQ2 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC18.11■□□□□ 0.49
SMARCC2Q8TAQ2 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SMARCC2Q8TAQ2 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC18.11■□□□□ 0.49
SMARCC2Q8TAQ2 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC18.11■□□□□ 0.49
SMARCC2Q8TAQ2 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC18.11■□□□□ 0.49
SMARCC2Q8TAQ2 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC18.11■□□□□ 0.49
SMARCC2Q8TAQ2 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SMARCC2Q8TAQ2 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SMARCC2Q8TAQ2 WASH3P-207ENST00000560956 1394 ntBASIC18.11■□□□□ 0.49
SMARCC2Q8TAQ2 AL121723.1-201ENST00000445194 1519 ntBASIC18.11■□□□□ 0.49
SMARCC2Q8TAQ2 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SMARCC2Q8TAQ2 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
SMARCC2Q8TAQ2 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC18.11■□□□□ 0.49
SMARCC2Q8TAQ2 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
SMARCC2Q8TAQ2 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
SMARCC2Q8TAQ2 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC18.11■□□□□ 0.49
SMARCC2Q8TAQ2 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC18.11■□□□□ 0.49
SMARCC2Q8TAQ2 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC18.11■□□□□ 0.49
SMARCC2Q8TAQ2 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
SMARCC2Q8TAQ2 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC18.11■□□□□ 0.49
SMARCC2Q8TAQ2 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC18.11■□□□□ 0.49
SMARCC2Q8TAQ2 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC18.11■□□□□ 0.49
SMARCC2Q8TAQ2 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SMARCC2Q8TAQ2 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SMARCC2Q8TAQ2 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SMARCC2Q8TAQ2 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SMARCC2Q8TAQ2 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SMARCC2Q8TAQ2 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SMARCC2Q8TAQ2 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SMARCC2Q8TAQ2 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SMARCC2Q8TAQ2 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SMARCC2Q8TAQ2 CYP2AB1P-202ENST00000454440 1456 ntBASIC18.1■□□□□ 0.49
SMARCC2Q8TAQ2 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC18.1■□□□□ 0.49
SMARCC2Q8TAQ2 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SMARCC2Q8TAQ2 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SMARCC2Q8TAQ2 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC18.1■□□□□ 0.49
SMARCC2Q8TAQ2 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
SMARCC2Q8TAQ2 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SMARCC2Q8TAQ2 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC18.1■□□□□ 0.49
SMARCC2Q8TAQ2 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC18.1■□□□□ 0.49
SMARCC2Q8TAQ2 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SMARCC2Q8TAQ2 TP53TG3HP-202ENST00000569755 579 ntBASIC18.1■□□□□ 0.49
SMARCC2Q8TAQ2 CHCHD2P3-201ENST00000603038 451 ntBASIC18.1■□□□□ 0.49
SMARCC2Q8TAQ2 AC025048.6-201ENST00000634326 1161 ntBASIC18.1■□□□□ 0.49
SMARCC2Q8TAQ2 AL645728.2-202ENST00000641679 227 ntBASIC18.1■□□□□ 0.49
SMARCC2Q8TAQ2 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SMARCC2Q8TAQ2 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SMARCC2Q8TAQ2 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC18.1■□□□□ 0.49
SMARCC2Q8TAQ2 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SMARCC2Q8TAQ2 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
SMARCC2Q8TAQ2 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SMARCC2Q8TAQ2 AJ011931.1-201ENST00000618749 2492 ntBASIC18.1■□□□□ 0.49
SMARCC2Q8TAQ2 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SMARCC2Q8TAQ2 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SMARCC2Q8TAQ2 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SMARCC2Q8TAQ2 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SMARCC2Q8TAQ2 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
SMARCC2Q8TAQ2 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SMARCC2Q8TAQ2 PCDHGB8P-201ENST00000502926 1973 ntBASIC18.1■□□□□ 0.49
SMARCC2Q8TAQ2 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SMARCC2Q8TAQ2 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SMARCC2Q8TAQ2 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC18.09■□□□□ 0.49
SMARCC2Q8TAQ2 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
SMARCC2Q8TAQ2 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms