Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
DNAAF1Q8NEP3 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
DNAAF1Q8NEP3 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
DNAAF1Q8NEP3 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
DNAAF1Q8NEP3 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
DNAAF1Q8NEP3 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
DNAAF1Q8NEP3 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC13.71□□□□□ -0.21
DNAAF1Q8NEP3 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC13.71□□□□□ -0.21
DNAAF1Q8NEP3 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
DNAAF1Q8NEP3 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
DNAAF1Q8NEP3 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC13.71□□□□□ -0.22
DNAAF1Q8NEP3 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
DNAAF1Q8NEP3 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
DNAAF1Q8NEP3 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC13.71□□□□□ -0.22
DNAAF1Q8NEP3 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
DNAAF1Q8NEP3 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
DNAAF1Q8NEP3 AC015656.1-201ENST00000624209 3578 ntBASIC13.71□□□□□ -0.22
DNAAF1Q8NEP3 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
DNAAF1Q8NEP3 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC13.71□□□□□ -0.22
DNAAF1Q8NEP3 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
DNAAF1Q8NEP3 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
DNAAF1Q8NEP3 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
DNAAF1Q8NEP3 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
DNAAF1Q8NEP3 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
DNAAF1Q8NEP3 AL136982.4-201ENST00000437689 1740 ntBASIC13.7□□□□□ -0.22
DNAAF1Q8NEP3 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC13.7□□□□□ -0.22
DNAAF1Q8NEP3 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
DNAAF1Q8NEP3 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
DNAAF1Q8NEP3 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC13.7□□□□□ -0.22
DNAAF1Q8NEP3 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC13.7□□□□□ -0.22
DNAAF1Q8NEP3 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
DNAAF1Q8NEP3 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
DNAAF1Q8NEP3 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
DNAAF1Q8NEP3 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
DNAAF1Q8NEP3 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
DNAAF1Q8NEP3 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
DNAAF1Q8NEP3 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
DNAAF1Q8NEP3 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC13.7□□□□□ -0.22
DNAAF1Q8NEP3 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
DNAAF1Q8NEP3 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
DNAAF1Q8NEP3 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
DNAAF1Q8NEP3 TNN-203ENST00000622870 3719 ntTSL 5 BASIC13.7□□□□□ -0.22
DNAAF1Q8NEP3 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
DNAAF1Q8NEP3 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC13.7□□□□□ -0.22
DNAAF1Q8NEP3 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
DNAAF1Q8NEP3 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
DNAAF1Q8NEP3 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC13.7□□□□□ -0.22
DNAAF1Q8NEP3 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
DNAAF1Q8NEP3 CASP2-207ENST00000619992 4006 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
DNAAF1Q8NEP3 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
DNAAF1Q8NEP3 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC13.7□□□□□ -0.22
DNAAF1Q8NEP3 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
DNAAF1Q8NEP3 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
DNAAF1Q8NEP3 NME2-201ENST00000393183 568 ntTSL 2 BASIC13.7□□□□□ -0.22
DNAAF1Q8NEP3 MCCD1P2-201ENST00000423228 335 ntBASIC13.7□□□□□ -0.22
DNAAF1Q8NEP3 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC13.7□□□□□ -0.22
DNAAF1Q8NEP3 SPDYE11-202ENST00000450699 704 ntBASIC13.7□□□□□ -0.22
DNAAF1Q8NEP3 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC13.7□□□□□ -0.22
DNAAF1Q8NEP3 RNA5SP410-201ENST00000516285 106 ntBASIC13.7□□□□□ -0.22
DNAAF1Q8NEP3 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC13.7□□□□□ -0.22
DNAAF1Q8NEP3 AC243562.1-201ENST00000560672 389 ntBASIC13.7□□□□□ -0.22
DNAAF1Q8NEP3 AP000842.3-202ENST00000569238 1080 ntBASIC13.7□□□□□ -0.22
DNAAF1Q8NEP3 SPDYE9P-201ENST00000570642 692 ntBASIC13.7□□□□□ -0.22
DNAAF1Q8NEP3 AC026979.3-201ENST00000607315 403 ntBASIC13.7□□□□□ -0.22
DNAAF1Q8NEP3 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC13.7□□□□□ -0.22
DNAAF1Q8NEP3 SPDYE10P-202ENST00000612005 668 ntBASIC13.7□□□□□ -0.22
DNAAF1Q8NEP3 SPDYE8P-202ENST00000612377 668 ntBASIC13.7□□□□□ -0.22
DNAAF1Q8NEP3 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC13.7□□□□□ -0.22
DNAAF1Q8NEP3 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
DNAAF1Q8NEP3 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC13.7□□□□□ -0.22
DNAAF1Q8NEP3 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
DNAAF1Q8NEP3 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
DNAAF1Q8NEP3 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
DNAAF1Q8NEP3 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
DNAAF1Q8NEP3 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
DNAAF1Q8NEP3 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
DNAAF1Q8NEP3 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
DNAAF1Q8NEP3 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
DNAAF1Q8NEP3 INTS4P1-203ENST00000641008 3683 ntBASIC13.7□□□□□ -0.22
DNAAF1Q8NEP3 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
DNAAF1Q8NEP3 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
DNAAF1Q8NEP3 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC13.7□□□□□ -0.22
DNAAF1Q8NEP3 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
DNAAF1Q8NEP3 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
DNAAF1Q8NEP3 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
DNAAF1Q8NEP3 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
DNAAF1Q8NEP3 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
DNAAF1Q8NEP3 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
DNAAF1Q8NEP3 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
DNAAF1Q8NEP3 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
DNAAF1Q8NEP3 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
DNAAF1Q8NEP3 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
DNAAF1Q8NEP3 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
DNAAF1Q8NEP3 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
DNAAF1Q8NEP3 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC13.69□□□□□ -0.22
DNAAF1Q8NEP3 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
DNAAF1Q8NEP3 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
DNAAF1Q8NEP3 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC13.69□□□□□ -0.22
DNAAF1Q8NEP3 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
DNAAF1Q8NEP3 KIAA0319-203ENST00000535378 6896 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms