Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
BEST3Q8N1M1 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
BEST3Q8N1M1 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
BEST3Q8N1M1 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC14.43□□□□□ -0.1
BEST3Q8N1M1 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
BEST3Q8N1M1 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
BEST3Q8N1M1 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
BEST3Q8N1M1 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
BEST3Q8N1M1 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC14.43□□□□□ -0.1
BEST3Q8N1M1 RAC2-202ENST00000401529 569 ntTSL 4 BASIC14.43□□□□□ -0.1
BEST3Q8N1M1 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
BEST3Q8N1M1 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
BEST3Q8N1M1 SOCS2P1-201ENST00000417727 557 ntBASIC14.43□□□□□ -0.1
BEST3Q8N1M1 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC14.43□□□□□ -0.1
BEST3Q8N1M1 AC234783.1-201ENST00000441761 496 ntBASIC14.43□□□□□ -0.1
BEST3Q8N1M1 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC14.43□□□□□ -0.1
BEST3Q8N1M1 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC14.43□□□□□ -0.1
BEST3Q8N1M1 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC14.43□□□□□ -0.1
BEST3Q8N1M1 AC124283.3-201ENST00000570869 594 ntBASIC14.43□□□□□ -0.1
BEST3Q8N1M1 AL512343.1-201ENST00000605837 169 ntBASIC14.43□□□□□ -0.1
BEST3Q8N1M1 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC14.43□□□□□ -0.1
BEST3Q8N1M1 MIR6752-201ENST00000618442 71 ntBASIC14.43□□□□□ -0.1
BEST3Q8N1M1 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
BEST3Q8N1M1 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC14.43□□□□□ -0.1
BEST3Q8N1M1 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC14.43□□□□□ -0.1
BEST3Q8N1M1 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC14.43□□□□□ -0.1
BEST3Q8N1M1 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
BEST3Q8N1M1 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
BEST3Q8N1M1 FES-207ENST00000444422 2266 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
BEST3Q8N1M1 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
BEST3Q8N1M1 FLII-221ENST00000578558 2377 ntTSL 5 BASIC14.42□□□□□ -0.1
BEST3Q8N1M1 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
BEST3Q8N1M1 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
BEST3Q8N1M1 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
BEST3Q8N1M1 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
BEST3Q8N1M1 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
BEST3Q8N1M1 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
BEST3Q8N1M1 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
BEST3Q8N1M1 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
BEST3Q8N1M1 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
BEST3Q8N1M1 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
BEST3Q8N1M1 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC14.42□□□□□ -0.1
BEST3Q8N1M1 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
BEST3Q8N1M1 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
BEST3Q8N1M1 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
BEST3Q8N1M1 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC14.42□□□□□ -0.1
BEST3Q8N1M1 MIR658-201ENST00000385210 100 ntBASIC14.42□□□□□ -0.1
BEST3Q8N1M1 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
BEST3Q8N1M1 C1QBPP1-201ENST00000400117 770 ntBASIC14.42□□□□□ -0.1
BEST3Q8N1M1 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
BEST3Q8N1M1 MIR1909-201ENST00000411312 80 ntBASIC14.42□□□□□ -0.1
BEST3Q8N1M1 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC14.42□□□□□ -0.1
BEST3Q8N1M1 HIST1H2BPS3-201ENST00000419683 341 ntBASIC14.42□□□□□ -0.1
BEST3Q8N1M1 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC14.42□□□□□ -0.1
BEST3Q8N1M1 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC14.42□□□□□ -0.1
BEST3Q8N1M1 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC14.42□□□□□ -0.1
BEST3Q8N1M1 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC14.42□□□□□ -0.1
BEST3Q8N1M1 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC14.42□□□□□ -0.1
BEST3Q8N1M1 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC14.42□□□□□ -0.1
BEST3Q8N1M1 AC120045.2-201ENST00000567334 178 ntBASIC14.42□□□□□ -0.1
BEST3Q8N1M1 ORC6-206ENST00000568364 888 ntTSL 5 BASIC14.42□□□□□ -0.1
BEST3Q8N1M1 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC14.42□□□□□ -0.1
BEST3Q8N1M1 MIR5189-201ENST00000577370 114 ntBASIC14.42□□□□□ -0.1
BEST3Q8N1M1 MIR4313-201ENST00000580760 101 ntBASIC14.42□□□□□ -0.1
BEST3Q8N1M1 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC14.42□□□□□ -0.1
BEST3Q8N1M1 MIR6805-201ENST00000615055 62 ntBASIC14.42□□□□□ -0.1
BEST3Q8N1M1 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
BEST3Q8N1M1 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC14.42□□□□□ -0.1
BEST3Q8N1M1 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
BEST3Q8N1M1 CYP2AB1P-202ENST00000454440 1456 ntBASIC14.42□□□□□ -0.1
BEST3Q8N1M1 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
BEST3Q8N1M1 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC14.42□□□□□ -0.1
BEST3Q8N1M1 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
BEST3Q8N1M1 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
BEST3Q8N1M1 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
BEST3Q8N1M1 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
BEST3Q8N1M1 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
BEST3Q8N1M1 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
BEST3Q8N1M1 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
BEST3Q8N1M1 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
BEST3Q8N1M1 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
BEST3Q8N1M1 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC14.41□□□□□ -0.1
BEST3Q8N1M1 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC14.41□□□□□ -0.1
BEST3Q8N1M1 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
BEST3Q8N1M1 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
BEST3Q8N1M1 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
BEST3Q8N1M1 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC14.41□□□□□ -0.1
BEST3Q8N1M1 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
BEST3Q8N1M1 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
BEST3Q8N1M1 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
BEST3Q8N1M1 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
BEST3Q8N1M1 ING5-213ENST00000636051 4199 ntTSL 5 BASIC14.41□□□□□ -0.1
BEST3Q8N1M1 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
BEST3Q8N1M1 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
BEST3Q8N1M1 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC14.41□□□□□ -0.1
BEST3Q8N1M1 MGST3-203ENST00000367885 680 ntTSL 2 BASIC14.41□□□□□ -0.1
BEST3Q8N1M1 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
BEST3Q8N1M1 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC14.41□□□□□ -0.1
BEST3Q8N1M1 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC14.41□□□□□ -0.1
BEST3Q8N1M1 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms