Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CROCCP3Q8IVE0 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
CROCCP3Q8IVE0 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC14.11□□□□□ -0.15
CROCCP3Q8IVE0 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CROCCP3Q8IVE0 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
CROCCP3Q8IVE0 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
CROCCP3Q8IVE0 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CROCCP3Q8IVE0 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
CROCCP3Q8IVE0 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
CROCCP3Q8IVE0 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC14.11□□□□□ -0.15
CROCCP3Q8IVE0 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
CROCCP3Q8IVE0 AC019294.4-201ENST00000561777 2905 ntBASIC14.11□□□□□ -0.15
CROCCP3Q8IVE0 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC14.11□□□□□ -0.15
CROCCP3Q8IVE0 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
CROCCP3Q8IVE0 TP73-207ENST00000378290 1831 ntTSL 2 BASIC14.11□□□□□ -0.15
CROCCP3Q8IVE0 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC14.11□□□□□ -0.15
CROCCP3Q8IVE0 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
CROCCP3Q8IVE0 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC14.1□□□□□ -0.15
CROCCP3Q8IVE0 NSUN5P1-202ENST00000421140 1535 ntBASIC14.1□□□□□ -0.15
CROCCP3Q8IVE0 NSUN5P2-203ENST00000457352 1529 ntBASIC14.1□□□□□ -0.15
CROCCP3Q8IVE0 WASH3P-207ENST00000560956 1394 ntBASIC14.1□□□□□ -0.15
CROCCP3Q8IVE0 FO538757.1-201ENST00000623083 1397 ntBASIC14.1□□□□□ -0.15
CROCCP3Q8IVE0 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CROCCP3Q8IVE0 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC14.1□□□□□ -0.15
CROCCP3Q8IVE0 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CROCCP3Q8IVE0 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
CROCCP3Q8IVE0 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC14.1□□□□□ -0.15
CROCCP3Q8IVE0 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CROCCP3Q8IVE0 AC040174.1-201ENST00000563003 2571 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CROCCP3Q8IVE0 USP19-202ENST00000398888 4559 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
CROCCP3Q8IVE0 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
CROCCP3Q8IVE0 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
CROCCP3Q8IVE0 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CROCCP3Q8IVE0 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CROCCP3Q8IVE0 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CROCCP3Q8IVE0 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CROCCP3Q8IVE0 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC14.1□□□□□ -0.15
CROCCP3Q8IVE0 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
CROCCP3Q8IVE0 GULP1-207ENST00000409843 2643 ntAPPRIS ALT1 TSL 2 BASIC14.1□□□□□ -0.15
CROCCP3Q8IVE0 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CROCCP3Q8IVE0 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC14.1□□□□□ -0.15
CROCCP3Q8IVE0 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
CROCCP3Q8IVE0 KRT17P6-201ENST00000453795 1220 ntBASIC14.1□□□□□ -0.15
CROCCP3Q8IVE0 TMEM198B-204ENST00000484016 896 ntBASIC14.1□□□□□ -0.15
CROCCP3Q8IVE0 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC14.1□□□□□ -0.15
CROCCP3Q8IVE0 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CROCCP3Q8IVE0 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC14.1□□□□□ -0.15
CROCCP3Q8IVE0 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
CROCCP3Q8IVE0 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC14.1□□□□□ -0.15
CROCCP3Q8IVE0 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
CROCCP3Q8IVE0 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC14.1□□□□□ -0.15
CROCCP3Q8IVE0 METTL13-202ENST00000362019 3022 ntTSL 2 BASIC14.1□□□□□ -0.15
CROCCP3Q8IVE0 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC14.1□□□□□ -0.15
CROCCP3Q8IVE0 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CROCCP3Q8IVE0 AP001282.1-201ENST00000531301 1499 ntBASIC14.1□□□□□ -0.15
CROCCP3Q8IVE0 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CROCCP3Q8IVE0 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC14.1□□□□□ -0.15
CROCCP3Q8IVE0 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC14.1□□□□□ -0.15
CROCCP3Q8IVE0 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CROCCP3Q8IVE0 MTHFR-210ENST00000641407 2387 ntBASIC14.1□□□□□ -0.15
CROCCP3Q8IVE0 AC129492.6-201ENST00000611383 1305 ntBASIC14.1□□□□□ -0.15
CROCCP3Q8IVE0 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CROCCP3Q8IVE0 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CROCCP3Q8IVE0 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CROCCP3Q8IVE0 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
CROCCP3Q8IVE0 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC14.1□□□□□ -0.15
CROCCP3Q8IVE0 AP001267.2-201ENST00000532619 2086 ntBASIC14.1□□□□□ -0.15
CROCCP3Q8IVE0 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC14.1□□□□□ -0.15
CROCCP3Q8IVE0 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CROCCP3Q8IVE0 MANBAL-201ENST00000373605 1915 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
CROCCP3Q8IVE0 AL031728.1-201ENST00000449034 2479 ntTSL 3 BASIC14.09□□□□□ -0.15
CROCCP3Q8IVE0 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CROCCP3Q8IVE0 AL118506.1-201ENST00000601296 3082 ntBASIC14.09□□□□□ -0.15
CROCCP3Q8IVE0 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
CROCCP3Q8IVE0 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CROCCP3Q8IVE0 MTA3-202ENST00000405592 5832 ntTSL 2 BASIC14.09□□□□□ -0.15
CROCCP3Q8IVE0 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CROCCP3Q8IVE0 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC14.09□□□□□ -0.15
CROCCP3Q8IVE0 ITGB2-201ENST00000302347 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CROCCP3Q8IVE0 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC14.09□□□□□ -0.15
CROCCP3Q8IVE0 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CROCCP3Q8IVE0 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CROCCP3Q8IVE0 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
CROCCP3Q8IVE0 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
CROCCP3Q8IVE0 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
CROCCP3Q8IVE0 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CROCCP3Q8IVE0 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC14.09□□□□□ -0.15
CROCCP3Q8IVE0 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CROCCP3Q8IVE0 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CROCCP3Q8IVE0 EHF-205ENST00000527935 557 ntTSL 2 BASIC14.09□□□□□ -0.15
CROCCP3Q8IVE0 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC14.09□□□□□ -0.15
CROCCP3Q8IVE0 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC14.09□□□□□ -0.15
CROCCP3Q8IVE0 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC14.09□□□□□ -0.15
CROCCP3Q8IVE0 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC14.09□□□□□ -0.15
CROCCP3Q8IVE0 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
CROCCP3Q8IVE0 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC14.09□□□□□ -0.15
CROCCP3Q8IVE0 NDUFV2-AS1-203ENST00000608008 779 ntBASIC14.09□□□□□ -0.15
CROCCP3Q8IVE0 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC14.09□□□□□ -0.15
CROCCP3Q8IVE0 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC14.09□□□□□ -0.15
CROCCP3Q8IVE0 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC14.09□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms