Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
RNF135Q8IUD6 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC16.45■□□□□ 0.22
RNF135Q8IUD6 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
RNF135Q8IUD6 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC16.45■□□□□ 0.22
RNF135Q8IUD6 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC16.45■□□□□ 0.22
RNF135Q8IUD6 AL591846.1-201ENST00000451736 433 ntBASIC16.45■□□□□ 0.22
RNF135Q8IUD6 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
RNF135Q8IUD6 PFN2-215ENST00000497148 743 ntTSL 4 BASIC16.45■□□□□ 0.22
RNF135Q8IUD6 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC16.45■□□□□ 0.22
RNF135Q8IUD6 AC120045.2-201ENST00000567334 178 ntBASIC16.45■□□□□ 0.22
RNF135Q8IUD6 AP001063.1-201ENST00000568332 529 ntBASIC16.45■□□□□ 0.22
RNF135Q8IUD6 SPIB-207ENST00000597855 564 ntTSL 4 BASIC16.45■□□□□ 0.22
RNF135Q8IUD6 KC6-205ENST00000599934 556 ntTSL 4 BASIC16.45■□□□□ 0.22
RNF135Q8IUD6 LARP4-220ENST00000615080 856 ntTSL 5 BASIC16.45■□□□□ 0.22
RNF135Q8IUD6 NID2-208ENST00000617139 3827 ntTSL 5 BASIC16.45■□□□□ 0.22
RNF135Q8IUD6 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC16.45■□□□□ 0.22
RNF135Q8IUD6 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC16.45■□□□□ 0.22
RNF135Q8IUD6 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC16.45■□□□□ 0.22
RNF135Q8IUD6 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RNF135Q8IUD6 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
RNF135Q8IUD6 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC16.45■□□□□ 0.22
RNF135Q8IUD6 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC16.45■□□□□ 0.22
RNF135Q8IUD6 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
RNF135Q8IUD6 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RNF135Q8IUD6 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC16.45■□□□□ 0.22
RNF135Q8IUD6 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RNF135Q8IUD6 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RNF135Q8IUD6 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC16.45■□□□□ 0.22
RNF135Q8IUD6 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC16.45■□□□□ 0.22
RNF135Q8IUD6 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
RNF135Q8IUD6 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
RNF135Q8IUD6 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC16.45■□□□□ 0.22
RNF135Q8IUD6 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC16.45■□□□□ 0.22
RNF135Q8IUD6 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC16.45■□□□□ 0.22
RNF135Q8IUD6 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
RNF135Q8IUD6 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC16.45■□□□□ 0.22
RNF135Q8IUD6 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
RNF135Q8IUD6 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
RNF135Q8IUD6 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RNF135Q8IUD6 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RNF135Q8IUD6 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
RNF135Q8IUD6 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RNF135Q8IUD6 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC16.44■□□□□ 0.22
RNF135Q8IUD6 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
RNF135Q8IUD6 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC16.44■□□□□ 0.22
RNF135Q8IUD6 USE1-206ENST00000595101 1776 ntTSL 2 BASIC16.44■□□□□ 0.22
RNF135Q8IUD6 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC16.44■□□□□ 0.22
RNF135Q8IUD6 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RNF135Q8IUD6 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RNF135Q8IUD6 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RNF135Q8IUD6 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RNF135Q8IUD6 MTHFR-217ENST00000641820 1569 ntBASIC16.44■□□□□ 0.22
RNF135Q8IUD6 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC16.44■□□□□ 0.22
RNF135Q8IUD6 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
RNF135Q8IUD6 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
RNF135Q8IUD6 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RNF135Q8IUD6 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
RNF135Q8IUD6 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RNF135Q8IUD6 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
RNF135Q8IUD6 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC16.44■□□□□ 0.22
RNF135Q8IUD6 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC16.44■□□□□ 0.22
RNF135Q8IUD6 BX284668.4-201ENST00000453917 508 ntBASIC16.44■□□□□ 0.22
RNF135Q8IUD6 RPS2P36-201ENST00000456516 831 ntBASIC16.44■□□□□ 0.22
RNF135Q8IUD6 AC091804.1-201ENST00000486888 567 ntBASIC16.44■□□□□ 0.22
RNF135Q8IUD6 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC16.44■□□□□ 0.22
RNF135Q8IUD6 AC020914.3-201ENST00000594712 304 ntBASIC16.44■□□□□ 0.22
RNF135Q8IUD6 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC16.44■□□□□ 0.22
RNF135Q8IUD6 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC16.44■□□□□ 0.22
RNF135Q8IUD6 AC128714.1-201ENST00000637035 887 ntBASIC16.44■□□□□ 0.22
RNF135Q8IUD6 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
RNF135Q8IUD6 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC16.44■□□□□ 0.22
RNF135Q8IUD6 SP100-205ENST00000409824 1802 ntTSL 5 BASIC16.44■□□□□ 0.22
RNF135Q8IUD6 AL136309.2-201ENST00000427049 2277 ntTSL 2 BASIC16.44■□□□□ 0.22
RNF135Q8IUD6 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC16.44■□□□□ 0.22
RNF135Q8IUD6 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
RNF135Q8IUD6 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RNF135Q8IUD6 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RNF135Q8IUD6 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RNF135Q8IUD6 HARS-202ENST00000415192 1401 ntTSL 2 BASIC16.44■□□□□ 0.22
RNF135Q8IUD6 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
RNF135Q8IUD6 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
RNF135Q8IUD6 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RNF135Q8IUD6 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC16.43■□□□□ 0.22
RNF135Q8IUD6 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RNF135Q8IUD6 AC068587.6-202ENST00000641839 5619 ntBASIC16.43■□□□□ 0.22
RNF135Q8IUD6 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
RNF135Q8IUD6 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RNF135Q8IUD6 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC16.43■□□□□ 0.22
RNF135Q8IUD6 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC16.43■□□□□ 0.22
RNF135Q8IUD6 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC16.43■□□□□ 0.22
RNF135Q8IUD6 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC16.43■□□□□ 0.22
RNF135Q8IUD6 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC16.43■□□□□ 0.22
RNF135Q8IUD6 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RNF135Q8IUD6 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC16.43■□□□□ 0.22
RNF135Q8IUD6 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
RNF135Q8IUD6 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
RNF135Q8IUD6 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RNF135Q8IUD6 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RNF135Q8IUD6 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
RNF135Q8IUD6 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms