Protein–RNA interactions for Protein: Q86WR0

CCDC25, Coiled-coil domain-containing protein 25, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC25Q86WR0 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC16.08■□□□□ 0.16
CCDC25Q86WR0 PDPK2P-202ENST00000562415 1191 ntBASIC16.08■□□□□ 0.16
CCDC25Q86WR0 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC16.08■□□□□ 0.16
CCDC25Q86WR0 AL513190.1-201ENST00000621254 727 ntBASIC16.08■□□□□ 0.16
CCDC25Q86WR0 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC16.08■□□□□ 0.16
CCDC25Q86WR0 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
CCDC25Q86WR0 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CCDC25Q86WR0 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CCDC25Q86WR0 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CCDC25Q86WR0 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
CCDC25Q86WR0 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
CCDC25Q86WR0 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CCDC25Q86WR0 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CCDC25Q86WR0 DMTN-203ENST00000381470 2601 ntTSL 5 BASIC16.08■□□□□ 0.16
CCDC25Q86WR0 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CCDC25Q86WR0 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CCDC25Q86WR0 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CCDC25Q86WR0 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
CCDC25Q86WR0 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC16.08■□□□□ 0.16
CCDC25Q86WR0 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CCDC25Q86WR0 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC16.08■□□□□ 0.16
CCDC25Q86WR0 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC16.07■□□□□ 0.16
CCDC25Q86WR0 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC16.07■□□□□ 0.16
CCDC25Q86WR0 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCDC25Q86WR0 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC16.07■□□□□ 0.16
CCDC25Q86WR0 RIMS1-214ENST00000518273 4116 ntTSL 5 BASIC16.07■□□□□ 0.16
CCDC25Q86WR0 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CCDC25Q86WR0 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCDC25Q86WR0 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CCDC25Q86WR0 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC16.07■□□□□ 0.16
CCDC25Q86WR0 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCDC25Q86WR0 FAAHP1-202ENST00000446499 1238 ntBASIC16.07■□□□□ 0.16
CCDC25Q86WR0 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC16.07■□□□□ 0.16
CCDC25Q86WR0 AL139010.1-201ENST00000454878 894 ntBASIC16.07■□□□□ 0.16
CCDC25Q86WR0 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC16.07■□□□□ 0.16
CCDC25Q86WR0 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC16.07■□□□□ 0.16
CCDC25Q86WR0 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC16.07■□□□□ 0.16
CCDC25Q86WR0 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC16.07■□□□□ 0.16
CCDC25Q86WR0 HNRNPUP1-201ENST00000554987 333 ntBASIC16.07■□□□□ 0.16
CCDC25Q86WR0 NKG7-205ENST00000600427 520 ntTSL 3 BASIC16.07■□□□□ 0.16
CCDC25Q86WR0 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC16.07■□□□□ 0.16
CCDC25Q86WR0 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
CCDC25Q86WR0 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC16.07■□□□□ 0.16
CCDC25Q86WR0 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC16.07■□□□□ 0.16
CCDC25Q86WR0 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CCDC25Q86WR0 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC16.07■□□□□ 0.16
CCDC25Q86WR0 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCDC25Q86WR0 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CCDC25Q86WR0 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCDC25Q86WR0 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC16.07■□□□□ 0.16
CCDC25Q86WR0 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC16.07■□□□□ 0.16
CCDC25Q86WR0 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCDC25Q86WR0 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCDC25Q86WR0 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCDC25Q86WR0 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCDC25Q86WR0 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCDC25Q86WR0 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCDC25Q86WR0 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CCDC25Q86WR0 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC16.07■□□□□ 0.16
CCDC25Q86WR0 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CCDC25Q86WR0 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CCDC25Q86WR0 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC16.07■□□□□ 0.16
CCDC25Q86WR0 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCDC25Q86WR0 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCDC25Q86WR0 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC16.07■□□□□ 0.16
CCDC25Q86WR0 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
CCDC25Q86WR0 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
CCDC25Q86WR0 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
CCDC25Q86WR0 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC25Q86WR0 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC25Q86WR0 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC25Q86WR0 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC16.06■□□□□ 0.16
CCDC25Q86WR0 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC16.06■□□□□ 0.16
CCDC25Q86WR0 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC25Q86WR0 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC25Q86WR0 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC25Q86WR0 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC25Q86WR0 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC25Q86WR0 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC16.06■□□□□ 0.16
CCDC25Q86WR0 CBR1-202ENST00000399191 838 ntTSL 3 BASIC16.06■□□□□ 0.16
CCDC25Q86WR0 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC16.06■□□□□ 0.16
CCDC25Q86WR0 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC16.06■□□□□ 0.16
CCDC25Q86WR0 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
CCDC25Q86WR0 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
CCDC25Q86WR0 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC16.06■□□□□ 0.16
CCDC25Q86WR0 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC16.06■□□□□ 0.16
CCDC25Q86WR0 AL135744.1-201ENST00000565098 629 ntBASIC16.06■□□□□ 0.16
CCDC25Q86WR0 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
CCDC25Q86WR0 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC25Q86WR0 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC25Q86WR0 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC16.06■□□□□ 0.16
CCDC25Q86WR0 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC25Q86WR0 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC25Q86WR0 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC25Q86WR0 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC25Q86WR0 AC104581.4-201ENST00000623126 3052 ntBASIC16.06■□□□□ 0.16
CCDC25Q86WR0 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC25Q86WR0 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
CCDC25Q86WR0 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC25Q86WR0 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms