Protein–RNA interactions for Protein: Q70E73

RAPH1, Ras-associated and pleckstrin homology domains-containing protein 1, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPH1Q70E73 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
RAPH1Q70E73 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RAPH1Q70E73 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
RAPH1Q70E73 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RAPH1Q70E73 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
RAPH1Q70E73 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
RAPH1Q70E73 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RAPH1Q70E73 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC15.64■□□□□ 0.09
RAPH1Q70E73 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
RAPH1Q70E73 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC15.64■□□□□ 0.09
RAPH1Q70E73 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
RAPH1Q70E73 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RAPH1Q70E73 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
RAPH1Q70E73 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
RAPH1Q70E73 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
RAPH1Q70E73 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RAPH1Q70E73 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RAPH1Q70E73 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
RAPH1Q70E73 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC15.64■□□□□ 0.09
RAPH1Q70E73 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC15.64■□□□□ 0.09
RAPH1Q70E73 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RAPH1Q70E73 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC15.64■□□□□ 0.09
RAPH1Q70E73 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC15.64■□□□□ 0.09
RAPH1Q70E73 PGAM5P1-201ENST00000518923 814 ntBASIC15.64■□□□□ 0.09
RAPH1Q70E73 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC15.64■□□□□ 0.09
RAPH1Q70E73 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC15.64■□□□□ 0.09
RAPH1Q70E73 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RAPH1Q70E73 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC15.64■□□□□ 0.09
RAPH1Q70E73 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC15.64■□□□□ 0.09
RAPH1Q70E73 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC15.64■□□□□ 0.09
RAPH1Q70E73 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC15.64■□□□□ 0.09
RAPH1Q70E73 AC084121.4-201ENST00000641598 221 ntBASIC15.64■□□□□ 0.09
RAPH1Q70E73 AF228730.8-201ENST00000642140 221 ntBASIC15.64■□□□□ 0.09
RAPH1Q70E73 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RAPH1Q70E73 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RAPH1Q70E73 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
RAPH1Q70E73 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
RAPH1Q70E73 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC15.64■□□□□ 0.09
RAPH1Q70E73 MARS-233ENST00000628866 2583 ntTSL 5 BASIC15.64■□□□□ 0.09
RAPH1Q70E73 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RAPH1Q70E73 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RAPH1Q70E73 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
RAPH1Q70E73 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC15.64■□□□□ 0.09
RAPH1Q70E73 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
RAPH1Q70E73 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC15.64■□□□□ 0.09
RAPH1Q70E73 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
RAPH1Q70E73 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
RAPH1Q70E73 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RAPH1Q70E73 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RAPH1Q70E73 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
RAPH1Q70E73 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC15.63■□□□□ 0.09
RAPH1Q70E73 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RAPH1Q70E73 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RAPH1Q70E73 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
RAPH1Q70E73 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
RAPH1Q70E73 LINC00552-201ENST00000625151 2579 ntBASIC15.63■□□□□ 0.09
RAPH1Q70E73 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC15.63■□□□□ 0.09
RAPH1Q70E73 ELL2P1-201ENST00000413990 1906 ntBASIC15.63■□□□□ 0.09
RAPH1Q70E73 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC15.63■□□□□ 0.09
RAPH1Q70E73 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC15.63■□□□□ 0.09
RAPH1Q70E73 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
RAPH1Q70E73 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
RAPH1Q70E73 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC15.63■□□□□ 0.09
RAPH1Q70E73 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RAPH1Q70E73 MIR574-201ENST00000385209 96 ntBASIC15.63■□□□□ 0.09
RAPH1Q70E73 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
RAPH1Q70E73 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
RAPH1Q70E73 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
RAPH1Q70E73 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RAPH1Q70E73 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
RAPH1Q70E73 KRT18P32-201ENST00000424695 1287 ntBASIC15.63■□□□□ 0.09
RAPH1Q70E73 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC15.63■□□□□ 0.09
RAPH1Q70E73 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC15.63■□□□□ 0.09
RAPH1Q70E73 TSFM-210ENST00000550559 897 ntTSL 5 BASIC15.63■□□□□ 0.09
RAPH1Q70E73 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC15.63■□□□□ 0.09
RAPH1Q70E73 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
RAPH1Q70E73 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC15.63■□□□□ 0.09
RAPH1Q70E73 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC15.63■□□□□ 0.09
RAPH1Q70E73 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RAPH1Q70E73 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
RAPH1Q70E73 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
RAPH1Q70E73 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
RAPH1Q70E73 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
RAPH1Q70E73 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
RAPH1Q70E73 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RAPH1Q70E73 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RAPH1Q70E73 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
RAPH1Q70E73 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
RAPH1Q70E73 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
RAPH1Q70E73 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC15.63■□□□□ 0.09
RAPH1Q70E73 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
RAPH1Q70E73 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
RAPH1Q70E73 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RAPH1Q70E73 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RAPH1Q70E73 DPEP1-202ENST00000393092 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RAPH1Q70E73 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC15.63■□□□□ 0.09
RAPH1Q70E73 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
RAPH1Q70E73 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
RAPH1Q70E73 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
RAPH1Q70E73 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC15.62■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms