Protein–RNA interactions for Protein: Q12772

SREBF2, Sterol regulatory element-binding protein 2, humanhuman

Predictions only

Length 1,141 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF2Q12772 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
SREBF2Q12772 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC17.43■□□□□ 0.38
SREBF2Q12772 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC17.43■□□□□ 0.38
SREBF2Q12772 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
SREBF2Q12772 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
SREBF2Q12772 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SREBF2Q12772 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC17.42■□□□□ 0.38
SREBF2Q12772 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SREBF2Q12772 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
SREBF2Q12772 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
SREBF2Q12772 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SREBF2Q12772 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC17.42■□□□□ 0.38
SREBF2Q12772 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
SREBF2Q12772 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SREBF2Q12772 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SREBF2Q12772 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SREBF2Q12772 CIDEC-202ENST00000383817 1199 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SREBF2Q12772 HLA-K-203ENST00000430151 1046 ntBASIC17.42■□□□□ 0.38
SREBF2Q12772 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC17.42■□□□□ 0.38
SREBF2Q12772 AC018463.1-201ENST00000456674 917 ntBASIC17.42■□□□□ 0.38
SREBF2Q12772 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SREBF2Q12772 AC026434.2-201ENST00000506094 1078 ntBASIC17.42■□□□□ 0.38
SREBF2Q12772 MEF2C-AS2-201ENST00000510274 463 ntTSL 5 BASIC17.42■□□□□ 0.38
SREBF2Q12772 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
SREBF2Q12772 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
SREBF2Q12772 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC17.42■□□□□ 0.38
SREBF2Q12772 MIR3677-201ENST00000578964 60 ntBASIC17.42■□□□□ 0.38
SREBF2Q12772 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC17.42■□□□□ 0.38
SREBF2Q12772 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SREBF2Q12772 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
SREBF2Q12772 AC008825.2-201ENST00000603374 718 ntBASIC17.42■□□□□ 0.38
SREBF2Q12772 MBLAC2-202ENST00000514906 1936 ntBASIC17.42■□□□□ 0.38
SREBF2Q12772 SLC44A3-209ENST00000532427 1912 ntTSL 2 BASIC17.42■□□□□ 0.38
SREBF2Q12772 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SREBF2Q12772 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC17.42■□□□□ 0.38
SREBF2Q12772 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC17.42■□□□□ 0.38
SREBF2Q12772 NTF3-202ENST00000423158 1336 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SREBF2Q12772 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC17.42■□□□□ 0.38
SREBF2Q12772 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC17.42■□□□□ 0.38
SREBF2Q12772 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
SREBF2Q12772 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SREBF2Q12772 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SREBF2Q12772 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SREBF2Q12772 AL645608.8-201ENST00000606034 2086 ntBASIC17.41■□□□□ 0.38
SREBF2Q12772 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SREBF2Q12772 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SREBF2Q12772 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SREBF2Q12772 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SREBF2Q12772 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
SREBF2Q12772 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
SREBF2Q12772 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SREBF2Q12772 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SREBF2Q12772 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC17.41■□□□□ 0.38
SREBF2Q12772 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC17.41■□□□□ 0.38
SREBF2Q12772 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SREBF2Q12772 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SREBF2Q12772 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.41■□□□□ 0.38
SREBF2Q12772 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC17.41■□□□□ 0.38
SREBF2Q12772 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SREBF2Q12772 C8G-201ENST00000224181 855 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SREBF2Q12772 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SREBF2Q12772 AL590093.1-201ENST00000416119 623 ntTSL 5 BASIC17.41■□□□□ 0.38
SREBF2Q12772 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
SREBF2Q12772 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC17.41■□□□□ 0.38
SREBF2Q12772 AC091179.2-201ENST00000495536 532 ntTSL 3 BASIC17.41■□□□□ 0.38
SREBF2Q12772 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC17.41■□□□□ 0.38
SREBF2Q12772 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SREBF2Q12772 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
SREBF2Q12772 MIR6858-201ENST00000620733 67 ntBASIC17.41■□□□□ 0.38
SREBF2Q12772 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SREBF2Q12772 AL132780.4-201ENST00000624870 1135 ntBASIC17.41■□□□□ 0.38
SREBF2Q12772 AC127024.7-201ENST00000625101 200 ntBASIC17.41■□□□□ 0.38
SREBF2Q12772 RPL35-206ENST00000629845 340 ntTSL 5 BASIC17.41■□□□□ 0.38
SREBF2Q12772 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC17.41■□□□□ 0.38
SREBF2Q12772 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC17.41■□□□□ 0.38
SREBF2Q12772 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SREBF2Q12772 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC17.41■□□□□ 0.38
SREBF2Q12772 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC17.41■□□□□ 0.38
SREBF2Q12772 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC17.41■□□□□ 0.38
SREBF2Q12772 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SREBF2Q12772 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC17.4■□□□□ 0.38
SREBF2Q12772 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
SREBF2Q12772 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SREBF2Q12772 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SREBF2Q12772 AC018695.7-201ENST00000624587 2492 ntBASIC17.4■□□□□ 0.38
SREBF2Q12772 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SREBF2Q12772 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SREBF2Q12772 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SREBF2Q12772 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC17.4■□□□□ 0.38
SREBF2Q12772 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC17.4■□□□□ 0.38
SREBF2Q12772 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
SREBF2Q12772 SERF2-206ENST00000409291 807 ntTSL 3 BASIC17.4■□□□□ 0.38
SREBF2Q12772 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SREBF2Q12772 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SREBF2Q12772 LINC00028-201ENST00000435497 587 ntTSL 2 BASIC17.4■□□□□ 0.38
SREBF2Q12772 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SREBF2Q12772 GLYCTK-204ENST00000471180 992 ntTSL 2 BASIC17.4■□□□□ 0.38
SREBF2Q12772 AC010234.1-201ENST00000494599 870 ntBASIC17.4■□□□□ 0.38
SREBF2Q12772 AC108199.1-201ENST00000504249 508 ntTSL 3 BASIC17.4■□□□□ 0.38
SREBF2Q12772 SCARNA21-201ENST00000517026 139 ntBASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms