Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 ERP29P1-201ENST00000442902 706 ntBASIC20.13■□□□□ 0.81
COL16A1Q07092 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
COL16A1Q07092 DIO1-204ENST00000524406 626 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
COL16A1Q07092 DIO1-213ENST00000532493 406 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
COL16A1Q07092 AP003390.1-201ENST00000533253 523 ntTSL 5 BASIC20.13■□□□□ 0.81
COL16A1Q07092 RN7SL357P-201ENST00000581065 298 ntBASIC20.13■□□□□ 0.81
COL16A1Q07092 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
COL16A1Q07092 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC20.13■□□□□ 0.81
COL16A1Q07092 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
COL16A1Q07092 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
COL16A1Q07092 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
COL16A1Q07092 CTBP2P8-201ENST00000422584 1330 ntBASIC20.13■□□□□ 0.81
COL16A1Q07092 CCL18-201ENST00000616054 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
COL16A1Q07092 BBS1-203ENST00000455748 1552 ntTSL 2 BASIC20.13■□□□□ 0.81
COL16A1Q07092 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC20.13■□□□□ 0.81
COL16A1Q07092 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
COL16A1Q07092 KRT17P5-201ENST00000332088 839 ntBASIC20.13■□□□□ 0.81
COL16A1Q07092 TRBV4-1-201ENST00000390357 373 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
COL16A1Q07092 TRBV4-2-201ENST00000390392 455 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
COL16A1Q07092 AC097059.1-201ENST00000413103 885 ntTSL 5 BASIC20.13■□□□□ 0.81
COL16A1Q07092 LINC01523-201ENST00000425385 450 ntTSL 2 BASIC20.13■□□□□ 0.81
COL16A1Q07092 RPL35P9-201ENST00000446059 350 ntBASIC20.13■□□□□ 0.81
COL16A1Q07092 ACTN1-AS1-202ENST00000553961 599 ntTSL 4 BASIC20.13■□□□□ 0.81
COL16A1Q07092 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC20.13■□□□□ 0.81
COL16A1Q07092 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
COL16A1Q07092 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
COL16A1Q07092 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
COL16A1Q07092 AL360270.3-201ENST00000609118 1348 ntBASIC20.12■□□□□ 0.81
COL16A1Q07092 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
COL16A1Q07092 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
COL16A1Q07092 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
COL16A1Q07092 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
COL16A1Q07092 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
COL16A1Q07092 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
COL16A1Q07092 AC069224.1-201ENST00000566372 1715 ntBASIC20.12■□□□□ 0.81
COL16A1Q07092 ZNRD1-203ENST00000376782 736 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
COL16A1Q07092 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
COL16A1Q07092 AC012506.1-201ENST00000423706 525 ntTSL 4 BASIC20.12■□□□□ 0.81
COL16A1Q07092 ATXN8OS-202ENST00000424524 1236 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
COL16A1Q07092 MBP-238ENST00000580402 915 ntTSL 5 BASIC20.12■□□□□ 0.81
COL16A1Q07092 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC20.12■□□□□ 0.81
COL16A1Q07092 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC20.12■□□□□ 0.81
COL16A1Q07092 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
COL16A1Q07092 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
COL16A1Q07092 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
COL16A1Q07092 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC20.11■□□□□ 0.81
COL16A1Q07092 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
COL16A1Q07092 AC006449.5-201ENST00000610658 2098 ntBASIC20.11■□□□□ 0.81
COL16A1Q07092 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
COL16A1Q07092 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
COL16A1Q07092 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC20.11■□□□□ 0.81
COL16A1Q07092 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC20.11■□□□□ 0.81
COL16A1Q07092 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC20.11■□□□□ 0.81
COL16A1Q07092 OR2K2-201ENST00000302681 1078 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
COL16A1Q07092 NME6-208ENST00000435684 599 ntTSL 2 BASIC20.11■□□□□ 0.81
COL16A1Q07092 AP001062.3-202ENST00000444409 619 ntTSL 2 BASIC20.11■□□□□ 0.81
COL16A1Q07092 AL583839.1-201ENST00000445280 691 ntTSL 3 BASIC20.11■□□□□ 0.81
COL16A1Q07092 RPL9-203ENST00000449470 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
COL16A1Q07092 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC20.11■□□□□ 0.81
COL16A1Q07092 LINC00173-201ENST00000470091 435 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
COL16A1Q07092 AC087620.1-201ENST00000520037 447 ntTSL 3 BASIC20.11■□□□□ 0.81
COL16A1Q07092 DUXAP9-201ENST00000547220 665 ntTSL 3 BASIC20.11■□□□□ 0.81
COL16A1Q07092 AC130456.3-201ENST00000561762 633 ntTSL 3 BASIC20.11■□□□□ 0.81
COL16A1Q07092 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
COL16A1Q07092 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC20.11■□□□□ 0.81
COL16A1Q07092 AL137793.2-201ENST00000632635 659 ntTSL 3 BASIC20.11■□□□□ 0.81
COL16A1Q07092 HERPUD1-202ENST00000344114 1388 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
COL16A1Q07092 MINDY4B-201ENST00000465419 1383 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
COL16A1Q07092 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
COL16A1Q07092 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
COL16A1Q07092 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
COL16A1Q07092 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
COL16A1Q07092 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
COL16A1Q07092 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
COL16A1Q07092 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
COL16A1Q07092 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
COL16A1Q07092 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
COL16A1Q07092 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
COL16A1Q07092 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
COL16A1Q07092 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
COL16A1Q07092 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC20.1■□□□□ 0.81
COL16A1Q07092 ZBTB45P1-201ENST00000452761 1456 ntBASIC20.1■□□□□ 0.81
COL16A1Q07092 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC20.1■□□□□ 0.81
COL16A1Q07092 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
COL16A1Q07092 CUTA-203ENST00000374500 937 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
COL16A1Q07092 CXCL12-205ENST00000395794 1052 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
COL16A1Q07092 KCNE1-203ENST00000399286 1204 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
COL16A1Q07092 AC079949.1-201ENST00000541419 505 ntTSL 3 BASIC20.1■□□□□ 0.81
COL16A1Q07092 AC009779.3-204ENST00000549424 367 ntTSL 3 BASIC20.1■□□□□ 0.81
COL16A1Q07092 ANAPC11-206ENST00000571874 636 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
COL16A1Q07092 AL118522.1-201ENST00000611368 560 ntBASIC20.1■□□□□ 0.81
COL16A1Q07092 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
COL16A1Q07092 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
COL16A1Q07092 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
COL16A1Q07092 COQ3-201ENST00000254759 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
COL16A1Q07092 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
COL16A1Q07092 MIR3936HG-204ENST00000621103 1793 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
COL16A1Q07092 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
COL16A1Q07092 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
COL16A1Q07092 AC007613.1-201ENST00000572811 2597 ntBASIC20.1■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms