Protein–RNA interactions for Protein: P98172

EFNB1, Ephrin-B1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1P98172 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
EFNB1P98172 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
EFNB1P98172 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC13.82□□□□□ -0.2
EFNB1P98172 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
EFNB1P98172 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
EFNB1P98172 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
EFNB1P98172 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC13.82□□□□□ -0.2
EFNB1P98172 AL035456.1-201ENST00000456064 1369 ntBASIC13.82□□□□□ -0.2
EFNB1P98172 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC13.82□□□□□ -0.2
EFNB1P98172 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC13.82□□□□□ -0.2
EFNB1P98172 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC13.82□□□□□ -0.2
EFNB1P98172 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
EFNB1P98172 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
EFNB1P98172 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
EFNB1P98172 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
EFNB1P98172 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
EFNB1P98172 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
EFNB1P98172 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC13.81□□□□□ -0.2
EFNB1P98172 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
EFNB1P98172 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
EFNB1P98172 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC13.81□□□□□ -0.2
EFNB1P98172 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
EFNB1P98172 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
EFNB1P98172 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
EFNB1P98172 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC13.81□□□□□ -0.2
EFNB1P98172 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC13.81□□□□□ -0.2
EFNB1P98172 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
EFNB1P98172 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
EFNB1P98172 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
EFNB1P98172 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
EFNB1P98172 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
EFNB1P98172 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC13.81□□□□□ -0.2
EFNB1P98172 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
EFNB1P98172 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC13.81□□□□□ -0.2
EFNB1P98172 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
EFNB1P98172 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
EFNB1P98172 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC13.81□□□□□ -0.2
EFNB1P98172 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
EFNB1P98172 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
EFNB1P98172 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
EFNB1P98172 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC13.81□□□□□ -0.2
EFNB1P98172 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC13.81□□□□□ -0.2
EFNB1P98172 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC13.81□□□□□ -0.2
EFNB1P98172 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
EFNB1P98172 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
EFNB1P98172 GPS2P2-201ENST00000430745 888 ntBASIC13.81□□□□□ -0.2
EFNB1P98172 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
EFNB1P98172 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC13.81□□□□□ -0.2
EFNB1P98172 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC13.81□□□□□ -0.2
EFNB1P98172 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC13.81□□□□□ -0.2
EFNB1P98172 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
EFNB1P98172 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC13.81□□□□□ -0.2
EFNB1P98172 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
EFNB1P98172 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
EFNB1P98172 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
EFNB1P98172 HM13-202ENST00000340852 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
EFNB1P98172 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
EFNB1P98172 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
EFNB1P98172 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC13.81□□□□□ -0.2
EFNB1P98172 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
EFNB1P98172 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
EFNB1P98172 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
EFNB1P98172 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC13.81□□□□□ -0.2
EFNB1P98172 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
EFNB1P98172 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
EFNB1P98172 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC13.81□□□□□ -0.2
EFNB1P98172 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
EFNB1P98172 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
EFNB1P98172 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC13.81□□□□□ -0.2
EFNB1P98172 CYP2AB1P-202ENST00000454440 1456 ntBASIC13.8□□□□□ -0.2
EFNB1P98172 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC13.8□□□□□ -0.2
EFNB1P98172 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
EFNB1P98172 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
EFNB1P98172 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC13.8□□□□□ -0.2
EFNB1P98172 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
EFNB1P98172 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
EFNB1P98172 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
EFNB1P98172 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
EFNB1P98172 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
EFNB1P98172 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC13.8□□□□□ -0.2
EFNB1P98172 INTS4P1-203ENST00000641008 3683 ntBASIC13.8□□□□□ -0.2
EFNB1P98172 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
EFNB1P98172 NOX5-203ENST00000448182 2498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
EFNB1P98172 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC13.8□□□□□ -0.2
EFNB1P98172 TP73-209ENST00000603362 1668 ntTSL 5 BASIC13.8□□□□□ -0.2
EFNB1P98172 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
EFNB1P98172 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
EFNB1P98172 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC13.8□□□□□ -0.2
EFNB1P98172 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC13.8□□□□□ -0.2
EFNB1P98172 TPM4P1-201ENST00000436100 807 ntBASIC13.8□□□□□ -0.2
EFNB1P98172 FDX1P1-201ENST00000449115 551 ntBASIC13.8□□□□□ -0.2
EFNB1P98172 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC13.8□□□□□ -0.2
EFNB1P98172 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
EFNB1P98172 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC13.8□□□□□ -0.2
EFNB1P98172 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC13.8□□□□□ -0.2
EFNB1P98172 AC025048.3-201ENST00000590609 569 ntBASIC13.8□□□□□ -0.2
EFNB1P98172 AC022145.2-201ENST00000598203 171 ntBASIC13.8□□□□□ -0.2
EFNB1P98172 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC13.8□□□□□ -0.2
EFNB1P98172 AC005702.4-201ENST00000618393 416 ntBASIC13.8□□□□□ -0.2
EFNB1P98172 AF228730.6-201ENST00000641497 218 ntBASIC13.8□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms