Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC14.5□□□□□ -0.09
CDH12P55289 AC005912.2-201ENST00000619492 2400 ntBASIC14.5□□□□□ -0.09
CDH12P55289 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDH12P55289 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CDH12P55289 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
CDH12P55289 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CDH12P55289 AP000347.1-202ENST00000435868 847 ntBASIC14.5□□□□□ -0.09
CDH12P55289 DNAJB3-201ENST00000446806 729 ntBASIC14.5□□□□□ -0.09
CDH12P55289 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDH12P55289 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC14.5□□□□□ -0.09
CDH12P55289 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC14.5□□□□□ -0.09
CDH12P55289 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC14.5□□□□□ -0.09
CDH12P55289 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC14.5□□□□□ -0.09
CDH12P55289 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC14.5□□□□□ -0.09
CDH12P55289 HOTTIP_1.1-201ENST00000620415 57 ntBASIC14.5□□□□□ -0.09
CDH12P55289 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CDH12P55289 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDH12P55289 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDH12P55289 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDH12P55289 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDH12P55289 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CDH12P55289 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDH12P55289 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDH12P55289 ATP2B3-202ENST00000349466 4280 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
CDH12P55289 AC067750.1-201ENST00000608826 6545 ntBASIC14.5□□□□□ -0.09
CDH12P55289 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC14.5□□□□□ -0.09
CDH12P55289 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDH12P55289 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDH12P55289 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
CDH12P55289 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CDH12P55289 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
CDH12P55289 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
CDH12P55289 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
CDH12P55289 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC14.5□□□□□ -0.09
CDH12P55289 CNTNAP3P2-201ENST00000617175 3861 ntBASIC14.49□□□□□ -0.09
CDH12P55289 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
CDH12P55289 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDH12P55289 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CDH12P55289 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC14.49□□□□□ -0.09
CDH12P55289 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC14.49□□□□□ -0.09
CDH12P55289 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDH12P55289 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC14.49□□□□□ -0.09
CDH12P55289 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDH12P55289 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDH12P55289 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
CDH12P55289 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDH12P55289 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CDH12P55289 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CDH12P55289 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC14.49□□□□□ -0.09
CDH12P55289 FAM58DP-201ENST00000428076 619 ntBASIC14.49□□□□□ -0.09
CDH12P55289 YBX1P5-201ENST00000509441 847 ntBASIC14.49□□□□□ -0.09
CDH12P55289 ALG1L8P-201ENST00000533887 760 ntBASIC14.49□□□□□ -0.09
CDH12P55289 TSFM-210ENST00000550559 897 ntTSL 5 BASIC14.49□□□□□ -0.09
CDH12P55289 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC14.49□□□□□ -0.09
CDH12P55289 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC14.49□□□□□ -0.09
CDH12P55289 MIR4469-201ENST00000583919 79 ntBASIC14.49□□□□□ -0.09
CDH12P55289 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CDH12P55289 AC097359.3-201ENST00000603982 1210 ntBASIC14.49□□□□□ -0.09
CDH12P55289 AL513210.1-201ENST00000629608 234 ntBASIC14.49□□□□□ -0.09
CDH12P55289 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CDH12P55289 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDH12P55289 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDH12P55289 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDH12P55289 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC14.49□□□□□ -0.09
CDH12P55289 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDH12P55289 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDH12P55289 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDH12P55289 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
CDH12P55289 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CDH12P55289 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC14.49□□□□□ -0.09
CDH12P55289 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC14.49□□□□□ -0.09
CDH12P55289 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CDH12P55289 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
CDH12P55289 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC14.49□□□□□ -0.09
CDH12P55289 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CDH12P55289 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CDH12P55289 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC14.48□□□□□ -0.09
CDH12P55289 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDH12P55289 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CDH12P55289 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC14.48□□□□□ -0.09
CDH12P55289 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CDH12P55289 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDH12P55289 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC14.48□□□□□ -0.09
CDH12P55289 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDH12P55289 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC14.48□□□□□ -0.09
CDH12P55289 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDH12P55289 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CDH12P55289 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDH12P55289 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDH12P55289 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDH12P55289 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CDH12P55289 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
CDH12P55289 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CDH12P55289 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CDH12P55289 STOM-202ENST00000347359 870 ntTSL 2 BASIC14.48□□□□□ -0.09
CDH12P55289 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CDH12P55289 AC004461.1-201ENST00000412461 403 ntBASIC14.48□□□□□ -0.09
CDH12P55289 KRT18P32-201ENST00000424695 1287 ntBASIC14.48□□□□□ -0.09
CDH12P55289 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC14.48□□□□□ -0.09
CDH12P55289 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms