Protein–RNA interactions for Protein: P54709

ATP1B3, Sodium/potassium-transporting ATPase subunit beta-3, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1B3P54709 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC13.52□□□□□ -0.25
ATP1B3P54709 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC13.52□□□□□ -0.25
ATP1B3P54709 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
ATP1B3P54709 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC13.52□□□□□ -0.25
ATP1B3P54709 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
ATP1B3P54709 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
ATP1B3P54709 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
ATP1B3P54709 SMAD2-202ENST00000356825 10445 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
ATP1B3P54709 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
ATP1B3P54709 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
ATP1B3P54709 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ATP1B3P54709 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
ATP1B3P54709 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC13.51□□□□□ -0.25
ATP1B3P54709 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
ATP1B3P54709 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ATP1B3P54709 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
ATP1B3P54709 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
ATP1B3P54709 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
ATP1B3P54709 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
ATP1B3P54709 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ATP1B3P54709 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC13.51□□□□□ -0.25
ATP1B3P54709 AC009090.5-201ENST00000624886 2285 ntBASIC13.51□□□□□ -0.25
ATP1B3P54709 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ATP1B3P54709 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC13.51□□□□□ -0.25
ATP1B3P54709 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ATP1B3P54709 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
ATP1B3P54709 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
ATP1B3P54709 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ATP1B3P54709 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
ATP1B3P54709 AC126365.1-201ENST00000578585 1514 ntBASIC13.51□□□□□ -0.25
ATP1B3P54709 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
ATP1B3P54709 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC13.51□□□□□ -0.25
ATP1B3P54709 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC13.51□□□□□ -0.25
ATP1B3P54709 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC13.51□□□□□ -0.25
ATP1B3P54709 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC13.51□□□□□ -0.25
ATP1B3P54709 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ATP1B3P54709 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ATP1B3P54709 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
ATP1B3P54709 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC13.51□□□□□ -0.25
ATP1B3P54709 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC13.51□□□□□ -0.25
ATP1B3P54709 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC13.51□□□□□ -0.25
ATP1B3P54709 MIR3687-2-201ENST00000577708 61 ntBASIC13.51□□□□□ -0.25
ATP1B3P54709 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC13.51□□□□□ -0.25
ATP1B3P54709 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC13.51□□□□□ -0.25
ATP1B3P54709 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC13.51□□□□□ -0.25
ATP1B3P54709 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC13.51□□□□□ -0.25
ATP1B3P54709 AC097359.3-201ENST00000603982 1210 ntBASIC13.51□□□□□ -0.25
ATP1B3P54709 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC13.51□□□□□ -0.25
ATP1B3P54709 MIR3687-1-201ENST00000614492 61 ntBASIC13.51□□□□□ -0.25
ATP1B3P54709 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
ATP1B3P54709 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC13.51□□□□□ -0.25
ATP1B3P54709 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC13.51□□□□□ -0.25
ATP1B3P54709 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ATP1B3P54709 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
ATP1B3P54709 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
ATP1B3P54709 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
ATP1B3P54709 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
ATP1B3P54709 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
ATP1B3P54709 AL390755.1-201ENST00000623716 2027 ntBASIC13.51□□□□□ -0.25
ATP1B3P54709 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
ATP1B3P54709 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ATP1B3P54709 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
ATP1B3P54709 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC13.5□□□□□ -0.25
ATP1B3P54709 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC13.5□□□□□ -0.25
ATP1B3P54709 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC13.5□□□□□ -0.25
ATP1B3P54709 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ATP1B3P54709 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC13.5□□□□□ -0.25
ATP1B3P54709 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ATP1B3P54709 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
ATP1B3P54709 MARS-233ENST00000628866 2583 ntTSL 5 BASIC13.5□□□□□ -0.25
ATP1B3P54709 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
ATP1B3P54709 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
ATP1B3P54709 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
ATP1B3P54709 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ATP1B3P54709 RPS19-201ENST00000221975 500 ntTSL 3 BASIC13.5□□□□□ -0.25
ATP1B3P54709 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ATP1B3P54709 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
ATP1B3P54709 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ATP1B3P54709 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
ATP1B3P54709 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ATP1B3P54709 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC13.5□□□□□ -0.25
ATP1B3P54709 FO393414.2-201ENST00000405153 598 ntBASIC13.5□□□□□ -0.25
ATP1B3P54709 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC13.5□□□□□ -0.25
ATP1B3P54709 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ATP1B3P54709 AZGP1P1-201ENST00000411909 902 ntBASIC13.5□□□□□ -0.25
ATP1B3P54709 AC136604.1-201ENST00000418535 575 ntBASIC13.5□□□□□ -0.25
ATP1B3P54709 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC13.5□□□□□ -0.25
ATP1B3P54709 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC13.5□□□□□ -0.25
ATP1B3P54709 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC13.5□□□□□ -0.25
ATP1B3P54709 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC13.5□□□□□ -0.25
ATP1B3P54709 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC13.5□□□□□ -0.25
ATP1B3P54709 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC13.5□□□□□ -0.25
ATP1B3P54709 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC13.5□□□□□ -0.25
ATP1B3P54709 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
ATP1B3P54709 HOTTIP_1.1-201ENST00000620415 57 ntBASIC13.5□□□□□ -0.25
ATP1B3P54709 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC13.5□□□□□ -0.25
ATP1B3P54709 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
ATP1B3P54709 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC13.5□□□□□ -0.25
ATP1B3P54709 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
ATP1B3P54709 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms