Protein–RNA interactions for Protein: P52952

NKX2-5, Homeobox protein Nkx-2.5, humanhuman

Predicted RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-5P52952 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC13.18□□□□□ -0.3
NKX2-5P52952 CC2D1A-201ENST00000318003 3581 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
NKX2-5P52952 AC111170.3-201ENST00000624282 2464 ntBASIC13.18□□□□□ -0.3
NKX2-5P52952 KRT74-201ENST00000305620 2788 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NKX2-5P52952 DGKA-202ENST00000394147 2770 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
NKX2-5P52952 SLC28A1-203ENST00000394573 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NKX2-5P52952 CPT1C-204ENST00000405931 2785 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
NKX2-5P52952 HNRNPUL1-207ENST00000595018 2794 ntTSL 2 BASIC13.18□□□□□ -0.3
NKX2-5P52952 AL353692.3-201ENST00000407031 1396 ntBASIC13.18□□□□□ -0.3
NKX2-5P52952 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC13.18□□□□□ -0.3
NKX2-5P52952 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC13.18□□□□□ -0.3
NKX2-5P52952 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
NKX2-5P52952 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
NKX2-5P52952 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC13.18□□□□□ -0.3
NKX2-5P52952 KCNIP1-208ENST00000520740 1845 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
NKX2-5P52952 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
NKX2-5P52952 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NKX2-5P52952 AMOTL2-202ENST00000422605 4335 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
NKX2-5P52952 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
NKX2-5P52952 SNX25-201ENST00000264694 3264 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
NKX2-5P52952 INTS13-201ENST00000261191 2974 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NKX2-5P52952 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC13.17□□□□□ -0.3
NKX2-5P52952 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NKX2-5P52952 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
NKX2-5P52952 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
NKX2-5P52952 MKX-201ENST00000375790 3846 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NKX2-5P52952 SUPT20HL1-201ENST00000436466 2618 ntBASIC13.17□□□□□ -0.3
NKX2-5P52952 NEXN-201ENST00000330010 3195 ntTSL 2 BASIC13.17□□□□□ -0.3
NKX2-5P52952 SFI1-208ENST00000432498 4162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
NKX2-5P52952 AC131009.4-201ENST00000624048 1740 ntBASIC13.17□□□□□ -0.3
NKX2-5P52952 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
NKX2-5P52952 AL031714.1-202ENST00000568106 3107 ntTSL 5 BASIC13.17□□□□□ -0.3
NKX2-5P52952 SLC6A10P-201ENST00000330048 3846 ntTSL 2 BASIC13.17□□□□□ -0.3
NKX2-5P52952 HIST1H2APS4-201ENST00000362070 348 ntBASIC13.17□□□□□ -0.3
NKX2-5P52952 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NKX2-5P52952 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NKX2-5P52952 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC13.17□□□□□ -0.3
NKX2-5P52952 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
NKX2-5P52952 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC13.17□□□□□ -0.3
NKX2-5P52952 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC13.17□□□□□ -0.3
NKX2-5P52952 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC13.17□□□□□ -0.3
NKX2-5P52952 TMEM248-201ENST00000341567 4229 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NKX2-5P52952 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NKX2-5P52952 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
NKX2-5P52952 BCAS3-221ENST00000588874 2948 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
NKX2-5P52952 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NKX2-5P52952 C1S-202ENST00000360817 2635 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NKX2-5P52952 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NKX2-5P52952 ZNF689-201ENST00000287461 3547 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NKX2-5P52952 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
NKX2-5P52952 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
NKX2-5P52952 SATB2-201ENST00000260926 5318 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NKX2-5P52952 USO1-201ENST00000264904 4135 ntTSL 2 BASIC13.16□□□□□ -0.3
NKX2-5P52952 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
NKX2-5P52952 ASCC3-203ENST00000369143 3433 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
NKX2-5P52952 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
NKX2-5P52952 CDIP1-201ENST00000399599 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NKX2-5P52952 TRIM3-203ENST00000525074 3044 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
NKX2-5P52952 SLC26A6-207ENST00000420764 2630 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NKX2-5P52952 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NKX2-5P52952 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NKX2-5P52952 PER1-202ENST00000354903 3115 ntTSL 2 BASIC13.16□□□□□ -0.3
NKX2-5P52952 H3F3B-201ENST00000254810 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NKX2-5P52952 EPRS-201ENST00000366923 5014 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NKX2-5P52952 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
NKX2-5P52952 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
NKX2-5P52952 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
NKX2-5P52952 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
NKX2-5P52952 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
NKX2-5P52952 GAS7-202ENST00000396115 929 ntTSL 5 BASIC13.16□□□□□ -0.3
NKX2-5P52952 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC13.16□□□□□ -0.3
NKX2-5P52952 FAM197Y1-201ENST00000421178 764 ntBASIC13.16□□□□□ -0.3
NKX2-5P52952 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
NKX2-5P52952 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC13.16□□□□□ -0.3
NKX2-5P52952 CYP2A7P1-201ENST00000595391 815 ntBASIC13.16□□□□□ -0.3
NKX2-5P52952 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
NKX2-5P52952 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
NKX2-5P52952 LLGL1-203ENST00000621229 3187 ntTSL 5 BASIC13.16□□□□□ -0.3
NKX2-5P52952 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC13.16□□□□□ -0.3
NKX2-5P52952 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NKX2-5P52952 PTPRN-202ENST00000409251 3622 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
NKX2-5P52952 ATXN2L-225ENST00000570200 3635 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
NKX2-5P52952 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NKX2-5P52952 AL645937.6-201ENST00000641122 3727 ntBASIC13.16□□□□□ -0.3
NKX2-5P52952 HERC6-202ENST00000273960 3473 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
NKX2-5P52952 TBC1D22B-201ENST00000373491 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NKX2-5P52952 NFATC2-207ENST00000610033 2740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
NKX2-5P52952 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
NKX2-5P52952 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NKX2-5P52952 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
NKX2-5P52952 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC13.16□□□□□ -0.3
NKX2-5P52952 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC13.16□□□□□ -0.3
NKX2-5P52952 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NKX2-5P52952 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC13.16□□□□□ -0.3
NKX2-5P52952 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NKX2-5P52952 DSE-201ENST00000331677 7237 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
NKX2-5P52952 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
NKX2-5P52952 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
NKX2-5P52952 C6orf62-202ENST00000378119 4134 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
NKX2-5P52952 COBLL1-225ENST00000629362 3868 ntAPPRIS ALT2 TSL 2 BASIC13.15□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms