Protein–RNA interactions for Protein: P40818

USP8, Ubiquitin carboxyl-terminal hydrolase 8, humanhuman

Predictions only

Length 1,118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP8P40818 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
USP8P40818 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
USP8P40818 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
USP8P40818 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
USP8P40818 TUBB3P1-201ENST00000405796 1332 ntBASIC16.96■□□□□ 0.31
USP8P40818 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
USP8P40818 GRN-214ENST00000589265 1632 ntTSL 5 BASIC16.96■□□□□ 0.31
USP8P40818 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC16.96■□□□□ 0.31
USP8P40818 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.31
USP8P40818 MCL1-202ENST00000369026 3932 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
USP8P40818 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
USP8P40818 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
USP8P40818 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
USP8P40818 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC16.96■□□□□ 0.31
USP8P40818 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
USP8P40818 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
USP8P40818 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
USP8P40818 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
USP8P40818 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
USP8P40818 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
USP8P40818 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
USP8P40818 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
USP8P40818 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
USP8P40818 FO393414.2-201ENST00000405153 598 ntBASIC16.96■□□□□ 0.31
USP8P40818 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
USP8P40818 CNN2P2-201ENST00000443536 909 ntBASIC16.96■□□□□ 0.31
USP8P40818 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC16.96■□□□□ 0.31
USP8P40818 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
USP8P40818 CNN2P3-201ENST00000450201 906 ntBASIC16.96■□□□□ 0.31
USP8P40818 SLBP-205ENST00000488267 987 ntTSL 2 BASIC16.96■□□□□ 0.31
USP8P40818 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
USP8P40818 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC16.96■□□□□ 0.31
USP8P40818 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC16.96■□□□□ 0.31
USP8P40818 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
USP8P40818 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC16.96■□□□□ 0.31
USP8P40818 AL136317.3-201ENST00000618497 906 ntBASIC16.96■□□□□ 0.31
USP8P40818 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
USP8P40818 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
USP8P40818 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
USP8P40818 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
USP8P40818 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC16.96■□□□□ 0.31
USP8P40818 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
USP8P40818 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
USP8P40818 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
USP8P40818 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
USP8P40818 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
USP8P40818 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
USP8P40818 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
USP8P40818 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
USP8P40818 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC16.96■□□□□ 0.31
USP8P40818 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
USP8P40818 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.3
USP8P40818 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
USP8P40818 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
USP8P40818 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC16.96■□□□□ 0.3
USP8P40818 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
USP8P40818 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC16.95■□□□□ 0.3
USP8P40818 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
USP8P40818 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
USP8P40818 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
USP8P40818 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
USP8P40818 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
USP8P40818 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
USP8P40818 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
USP8P40818 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
USP8P40818 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
USP8P40818 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
USP8P40818 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
USP8P40818 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
USP8P40818 HIST3H2BA-201ENST00000436555 524 ntBASIC16.95■□□□□ 0.3
USP8P40818 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC16.95■□□□□ 0.3
USP8P40818 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC16.95■□□□□ 0.3
USP8P40818 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
USP8P40818 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
USP8P40818 AC125807.1-201ENST00000483097 614 ntBASIC16.95■□□□□ 0.3
USP8P40818 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC16.95■□□□□ 0.3
USP8P40818 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC16.95■□□□□ 0.3
USP8P40818 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC16.95■□□□□ 0.3
USP8P40818 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC16.95■□□□□ 0.3
USP8P40818 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC16.95■□□□□ 0.3
USP8P40818 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC16.95■□□□□ 0.3
USP8P40818 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
USP8P40818 AC093028.1-201ENST00000622998 982 ntBASIC16.95■□□□□ 0.3
USP8P40818 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC16.95■□□□□ 0.3
USP8P40818 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
USP8P40818 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
USP8P40818 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
USP8P40818 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC16.95■□□□□ 0.3
USP8P40818 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC16.95■□□□□ 0.3
USP8P40818 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC16.95■□□□□ 0.3
USP8P40818 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
USP8P40818 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
USP8P40818 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
USP8P40818 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
USP8P40818 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
USP8P40818 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
USP8P40818 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
USP8P40818 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
USP8P40818 GRAMD4P3-201ENST00000621665 1669 ntBASIC16.94■□□□□ 0.3
USP8P40818 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms