Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
SNCAP37840 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
SNCAP37840 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
SNCAP37840 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SNCAP37840 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SNCAP37840 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
SNCAP37840 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
SNCAP37840 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
SNCAP37840 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC12.83□□□□□ -0.36
SNCAP37840 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC12.83□□□□□ -0.36
SNCAP37840 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
SNCAP37840 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SNCAP37840 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SNCAP37840 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SNCAP37840 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SNCAP37840 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC12.83□□□□□ -0.36
SNCAP37840 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC12.83□□□□□ -0.36
SNCAP37840 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
SNCAP37840 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SNCAP37840 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SNCAP37840 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SNCAP37840 CICP17-201ENST00000418553 2377 ntBASIC12.83□□□□□ -0.36
SNCAP37840 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
SNCAP37840 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC12.82□□□□□ -0.36
SNCAP37840 AL928921.2-201ENST00000641325 2442 ntBASIC12.82□□□□□ -0.36
SNCAP37840 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SNCAP37840 CYP4F3-201ENST00000221307 5050 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
SNCAP37840 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SNCAP37840 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
SNCAP37840 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC12.82□□□□□ -0.36
SNCAP37840 AC027601.5-201ENST00000624065 2482 ntBASIC12.82□□□□□ -0.36
SNCAP37840 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
SNCAP37840 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
SNCAP37840 WASH6P-202ENST00000359512 1437 ntBASIC12.82□□□□□ -0.36
SNCAP37840 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SNCAP37840 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC12.82□□□□□ -0.36
SNCAP37840 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC12.82□□□□□ -0.36
SNCAP37840 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
SNCAP37840 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SNCAP37840 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
SNCAP37840 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
SNCAP37840 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SNCAP37840 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
SNCAP37840 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SNCAP37840 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC12.82□□□□□ -0.36
SNCAP37840 AC079776.4-201ENST00000511039 504 ntBASIC12.82□□□□□ -0.36
SNCAP37840 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC12.82□□□□□ -0.36
SNCAP37840 AL662844.1-201ENST00000546340 181 ntBASIC12.82□□□□□ -0.36
SNCAP37840 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
SNCAP37840 AC002347.1-201ENST00000569543 541 ntBASIC12.82□□□□□ -0.36
SNCAP37840 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC12.82□□□□□ -0.36
SNCAP37840 AL049840.3-201ENST00000602669 611 ntBASIC12.82□□□□□ -0.36
SNCAP37840 MIR7706-201ENST00000613747 67 ntBASIC12.82□□□□□ -0.36
SNCAP37840 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC12.82□□□□□ -0.36
SNCAP37840 AL031008.1-201ENST00000619963 541 ntBASIC12.82□□□□□ -0.36
SNCAP37840 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC12.82□□□□□ -0.36
SNCAP37840 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SNCAP37840 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC12.82□□□□□ -0.36
SNCAP37840 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
SNCAP37840 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
SNCAP37840 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SNCAP37840 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SNCAP37840 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC12.82□□□□□ -0.36
SNCAP37840 TMEM87B-201ENST00000283206 5212 ntAPPRIS P1 TSL 2 BASIC12.82□□□□□ -0.36
SNCAP37840 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SNCAP37840 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
SNCAP37840 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SNCAP37840 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SNCAP37840 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
SNCAP37840 BCAR1-209ENST00000546196 1340 ntBASIC12.82□□□□□ -0.36
SNCAP37840 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
SNCAP37840 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC12.82□□□□□ -0.36
SNCAP37840 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SNCAP37840 HSPA7-201ENST00000445535 1927 ntBASIC12.82□□□□□ -0.36
SNCAP37840 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
SNCAP37840 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
SNCAP37840 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC12.82□□□□□ -0.36
SNCAP37840 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC12.82□□□□□ -0.36
SNCAP37840 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SNCAP37840 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC12.81□□□□□ -0.36
SNCAP37840 APP-205ENST00000358918 2366 ntTSL 5 BASIC12.81□□□□□ -0.36
SNCAP37840 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SNCAP37840 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC12.81□□□□□ -0.36
SNCAP37840 DMBT1P1-203ENST00000636837 4628 ntBASIC12.81□□□□□ -0.36
SNCAP37840 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC12.81□□□□□ -0.36
SNCAP37840 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SNCAP37840 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC12.81□□□□□ -0.36
SNCAP37840 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC12.81□□□□□ -0.36
SNCAP37840 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
SNCAP37840 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC12.81□□□□□ -0.36
SNCAP37840 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC12.81□□□□□ -0.36
SNCAP37840 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC12.81□□□□□ -0.36
SNCAP37840 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SNCAP37840 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC12.81□□□□□ -0.36
SNCAP37840 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
SNCAP37840 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
SNCAP37840 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC12.81□□□□□ -0.36
SNCAP37840 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC12.81□□□□□ -0.36
SNCAP37840 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
SNCAP37840 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms