Protein–RNA interactions for Protein: P28566

HTR1E, 5-hydroxytryptamine receptor 1E, humanhuman

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1EP28566 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC14.89□□□□□ -0.03
HTR1EP28566 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HTR1EP28566 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
HTR1EP28566 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
HTR1EP28566 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HTR1EP28566 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
HTR1EP28566 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
HTR1EP28566 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HTR1EP28566 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HTR1EP28566 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HTR1EP28566 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HTR1EP28566 PCDHA3-202ENST00000532566 4594 ntBASIC14.89□□□□□ -0.03
HTR1EP28566 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HTR1EP28566 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
HTR1EP28566 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HTR1EP28566 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC14.89□□□□□ -0.03
HTR1EP28566 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC14.89□□□□□ -0.03
HTR1EP28566 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HTR1EP28566 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
HTR1EP28566 LINC01225-203ENST00000563550 1244 ntBASIC14.89□□□□□ -0.03
HTR1EP28566 INO80E-210ENST00000567705 880 ntTSL 3 BASIC14.89□□□□□ -0.03
HTR1EP28566 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
HTR1EP28566 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC14.89□□□□□ -0.03
HTR1EP28566 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC14.89□□□□□ -0.03
HTR1EP28566 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC14.89□□□□□ -0.03
HTR1EP28566 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC14.89□□□□□ -0.03
HTR1EP28566 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
HTR1EP28566 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
HTR1EP28566 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HTR1EP28566 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC14.89□□□□□ -0.03
HTR1EP28566 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
HTR1EP28566 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
HTR1EP28566 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
HTR1EP28566 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
HTR1EP28566 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
HTR1EP28566 TRMT2B-201ENST00000372935 2921 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
HTR1EP28566 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
HTR1EP28566 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC14.88□□□□□ -0.03
HTR1EP28566 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC14.88□□□□□ -0.03
HTR1EP28566 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
HTR1EP28566 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC14.88□□□□□ -0.03
HTR1EP28566 WASH3P-207ENST00000560956 1394 ntBASIC14.88□□□□□ -0.03
HTR1EP28566 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
HTR1EP28566 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HTR1EP28566 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC14.88□□□□□ -0.03
HTR1EP28566 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
HTR1EP28566 NARF-206ENST00000457415 1668 ntTSL 5 BASIC14.88□□□□□ -0.03
HTR1EP28566 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC14.88□□□□□ -0.03
HTR1EP28566 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
HTR1EP28566 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC14.88□□□□□ -0.03
HTR1EP28566 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC14.88□□□□□ -0.03
HTR1EP28566 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
HTR1EP28566 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
HTR1EP28566 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HTR1EP28566 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HTR1EP28566 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HTR1EP28566 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC14.88□□□□□ -0.03
HTR1EP28566 PIN1P1-201ENST00000412108 996 ntBASIC14.88□□□□□ -0.03
HTR1EP28566 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC14.88□□□□□ -0.03
HTR1EP28566 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
HTR1EP28566 MEIS3P1-201ENST00000495167 958 ntBASIC14.88□□□□□ -0.03
HTR1EP28566 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC14.88□□□□□ -0.03
HTR1EP28566 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
HTR1EP28566 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
HTR1EP28566 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC14.88□□□□□ -0.03
HTR1EP28566 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC14.88□□□□□ -0.03
HTR1EP28566 AC025048.6-201ENST00000634326 1161 ntBASIC14.88□□□□□ -0.03
HTR1EP28566 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HTR1EP28566 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
HTR1EP28566 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
HTR1EP28566 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HTR1EP28566 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC14.88□□□□□ -0.03
HTR1EP28566 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HTR1EP28566 AC140479.7-201ENST00000636301 2332 ntBASIC14.88□□□□□ -0.03
HTR1EP28566 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC14.88□□□□□ -0.03
HTR1EP28566 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC14.88□□□□□ -0.03
HTR1EP28566 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
HTR1EP28566 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HTR1EP28566 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HTR1EP28566 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HTR1EP28566 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
HTR1EP28566 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC14.87□□□□□ -0.03
HTR1EP28566 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HTR1EP28566 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HTR1EP28566 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HTR1EP28566 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
HTR1EP28566 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC14.87□□□□□ -0.03
HTR1EP28566 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HTR1EP28566 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
HTR1EP28566 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
HTR1EP28566 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HTR1EP28566 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HTR1EP28566 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HTR1EP28566 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HTR1EP28566 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
HTR1EP28566 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
HTR1EP28566 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
HTR1EP28566 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
HTR1EP28566 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
HTR1EP28566 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms