Protein–RNA interactions for Protein: P25800

LMO1, Rhombotin-1, humanhuman

Predictions only

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1P25800 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
LMO1P25800 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC13.03□□□□□ -0.32
LMO1P25800 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LMO1P25800 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
LMO1P25800 RER1-203ENST00000378513 3000 ntTSL 3 BASIC13.03□□□□□ -0.32
LMO1P25800 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
LMO1P25800 AC091951.1-201ENST00000512854 2465 ntBASIC13.03□□□□□ -0.32
LMO1P25800 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
LMO1P25800 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LMO1P25800 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
LMO1P25800 AC139749.1-202ENST00000617529 3139 ntBASIC13.03□□□□□ -0.32
LMO1P25800 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC13.03□□□□□ -0.32
LMO1P25800 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LMO1P25800 RPS6KL1-210ENST00000555647 3309 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
LMO1P25800 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LMO1P25800 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
LMO1P25800 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
LMO1P25800 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC13.03□□□□□ -0.32
LMO1P25800 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC13.03□□□□□ -0.32
LMO1P25800 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
LMO1P25800 THUMPD3-210ENST00000515662 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
LMO1P25800 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
LMO1P25800 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
LMO1P25800 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
LMO1P25800 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.32
LMO1P25800 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.32
LMO1P25800 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC13.02□□□□□ -0.32
LMO1P25800 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
LMO1P25800 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
LMO1P25800 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
LMO1P25800 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
LMO1P25800 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
LMO1P25800 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC13.02□□□□□ -0.33
LMO1P25800 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
LMO1P25800 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC13.02□□□□□ -0.33
LMO1P25800 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC13.02□□□□□ -0.33
LMO1P25800 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC13.02□□□□□ -0.33
LMO1P25800 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC13.02□□□□□ -0.33
LMO1P25800 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC13.02□□□□□ -0.33
LMO1P25800 TSSK5P-201ENST00000423978 907 ntBASIC13.02□□□□□ -0.33
LMO1P25800 AC241585.1-201ENST00000433527 519 ntBASIC13.02□□□□□ -0.33
LMO1P25800 AC114501.2-201ENST00000439631 535 ntBASIC13.02□□□□□ -0.33
LMO1P25800 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC13.02□□□□□ -0.33
LMO1P25800 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC13.02□□□□□ -0.33
LMO1P25800 AC044860.1-202ENST00000559481 777 ntBASIC13.02□□□□□ -0.33
LMO1P25800 AC092337.1-201ENST00000568699 1129 ntBASIC13.02□□□□□ -0.33
LMO1P25800 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC13.02□□□□□ -0.33
LMO1P25800 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC13.02□□□□□ -0.33
LMO1P25800 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC13.02□□□□□ -0.33
LMO1P25800 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
LMO1P25800 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
LMO1P25800 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
LMO1P25800 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC13.02□□□□□ -0.33
LMO1P25800 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
LMO1P25800 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC13.02□□□□□ -0.33
LMO1P25800 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
LMO1P25800 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
LMO1P25800 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
LMO1P25800 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC13.02□□□□□ -0.33
LMO1P25800 AL121723.1-201ENST00000445194 1519 ntBASIC13.02□□□□□ -0.33
LMO1P25800 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
LMO1P25800 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
LMO1P25800 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
LMO1P25800 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
LMO1P25800 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
LMO1P25800 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
LMO1P25800 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC13.02□□□□□ -0.33
LMO1P25800 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LMO1P25800 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC13.01□□□□□ -0.33
LMO1P25800 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LMO1P25800 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC13.01□□□□□ -0.33
LMO1P25800 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LMO1P25800 OS9-204ENST00000389146 2091 ntTSL 2 BASIC13.01□□□□□ -0.33
LMO1P25800 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
LMO1P25800 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
LMO1P25800 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
LMO1P25800 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
LMO1P25800 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LMO1P25800 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LMO1P25800 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LMO1P25800 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
LMO1P25800 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
LMO1P25800 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LMO1P25800 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LMO1P25800 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
LMO1P25800 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LMO1P25800 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
LMO1P25800 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
LMO1P25800 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
LMO1P25800 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
LMO1P25800 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC13.01□□□□□ -0.33
LMO1P25800 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
LMO1P25800 VMA21-202ENST00000370361 693 ntTSL 5 BASIC13.01□□□□□ -0.33
LMO1P25800 AC104457.1-201ENST00000401024 814 ntBASIC13.01□□□□□ -0.33
LMO1P25800 MIR943-201ENST00000401286 94 ntBASIC13.01□□□□□ -0.33
LMO1P25800 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC13.01□□□□□ -0.33
LMO1P25800 TREML5P-201ENST00000421694 576 ntBASIC13.01□□□□□ -0.33
LMO1P25800 AC009477.1-201ENST00000452936 217 ntBASIC13.01□□□□□ -0.33
LMO1P25800 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC13.01□□□□□ -0.33
LMO1P25800 CYMP-203ENST00000474680 1263 ntBASIC13.01□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms