Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CCL1P22362 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CCL1P22362 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
CCL1P22362 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CCL1P22362 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
CCL1P22362 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC13.31□□□□□ -0.28
CCL1P22362 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CCL1P22362 TMEM179B-201ENST00000333449 1023 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CCL1P22362 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
CCL1P22362 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CCL1P22362 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CCL1P22362 DNAJB3-202ENST00000449667 1266 ntBASIC13.31□□□□□ -0.28
CCL1P22362 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC13.31□□□□□ -0.28
CCL1P22362 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
CCL1P22362 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC13.31□□□□□ -0.28
CCL1P22362 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC13.31□□□□□ -0.28
CCL1P22362 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC13.31□□□□□ -0.28
CCL1P22362 AC069120.2-201ENST00000524091 540 ntBASIC13.31□□□□□ -0.28
CCL1P22362 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC13.31□□□□□ -0.28
CCL1P22362 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC13.31□□□□□ -0.28
CCL1P22362 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC13.31□□□□□ -0.28
CCL1P22362 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC13.31□□□□□ -0.28
CCL1P22362 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC13.31□□□□□ -0.28
CCL1P22362 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC13.31□□□□□ -0.28
CCL1P22362 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
CCL1P22362 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
CCL1P22362 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC13.31□□□□□ -0.28
CCL1P22362 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC13.31□□□□□ -0.28
CCL1P22362 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
CCL1P22362 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
CCL1P22362 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CCL1P22362 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CCL1P22362 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CCL1P22362 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CCL1P22362 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CCL1P22362 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC13.31□□□□□ -0.28
CCL1P22362 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CCL1P22362 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC13.3□□□□□ -0.28
CCL1P22362 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCL1P22362 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC13.3□□□□□ -0.28
CCL1P22362 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCL1P22362 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CCL1P22362 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC13.3□□□□□ -0.28
CCL1P22362 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
CCL1P22362 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
CCL1P22362 AC026748.1-201ENST00000624349 3251 ntBASIC13.3□□□□□ -0.28
CCL1P22362 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC13.3□□□□□ -0.28
CCL1P22362 KANK2-207ENST00000589894 2703 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
CCL1P22362 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CCL1P22362 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CCL1P22362 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCL1P22362 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
CCL1P22362 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CCL1P22362 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCL1P22362 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CCL1P22362 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CCL1P22362 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC13.3□□□□□ -0.28
CCL1P22362 PKIG-203ENST00000372887 769 ntTSL 3 BASIC13.3□□□□□ -0.28
CCL1P22362 BAD-202ENST00000394531 631 ntTSL 3 BASIC13.3□□□□□ -0.28
CCL1P22362 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
CCL1P22362 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC13.3□□□□□ -0.28
CCL1P22362 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCL1P22362 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CCL1P22362 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC13.3□□□□□ -0.28
CCL1P22362 BAD-207ENST00000544785 525 ntTSL 3 BASIC13.3□□□□□ -0.28
CCL1P22362 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCL1P22362 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCL1P22362 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC13.3□□□□□ -0.28
CCL1P22362 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC13.3□□□□□ -0.28
CCL1P22362 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC13.3□□□□□ -0.28
CCL1P22362 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC13.3□□□□□ -0.28
CCL1P22362 AL158211.3-201ENST00000607385 239 ntBASIC13.3□□□□□ -0.28
CCL1P22362 AL596442.2-201ENST00000610240 980 ntBASIC13.3□□□□□ -0.28
CCL1P22362 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCL1P22362 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
CCL1P22362 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CCL1P22362 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
CCL1P22362 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCL1P22362 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCL1P22362 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC13.3□□□□□ -0.28
CCL1P22362 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
CCL1P22362 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC13.3□□□□□ -0.28
CCL1P22362 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC13.3□□□□□ -0.28
CCL1P22362 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCL1P22362 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC13.3□□□□□ -0.28
CCL1P22362 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CCL1P22362 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC13.3□□□□□ -0.28
CCL1P22362 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CCL1P22362 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC13.29□□□□□ -0.28
CCL1P22362 SLC9A7P1-202ENST00000556476 2239 ntBASIC13.29□□□□□ -0.28
CCL1P22362 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCL1P22362 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
CCL1P22362 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CCL1P22362 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC13.29□□□□□ -0.28
CCL1P22362 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC13.29□□□□□ -0.28
CCL1P22362 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
CCL1P22362 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
CCL1P22362 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC13.29□□□□□ -0.28
CCL1P22362 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC13.29□□□□□ -0.28
CCL1P22362 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms