Protein–RNA interactions for Protein: P16104

H2AFX, Histone H2AX, humanhuman

Predicted RBP Predictions only

Length 143 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFXP16104 AC061975.2-201ENST00000581722 295 ntBASIC16.07■□□□□ 0.16
H2AFXP16104 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC16.07■□□□□ 0.16
H2AFXP16104 AL591684.3-201ENST00000605187 298 ntBASIC16.07■□□□□ 0.16
H2AFXP16104 AC069148.1-201ENST00000608741 768 ntBASIC16.07■□□□□ 0.16
H2AFXP16104 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC16.07■□□□□ 0.16
H2AFXP16104 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
H2AFXP16104 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
H2AFXP16104 AC007787.1-201ENST00000588095 1583 ntBASIC16.07■□□□□ 0.16
H2AFXP16104 MVK-214ENST00000629016 1591 ntTSL 5 BASIC16.07■□□□□ 0.16
H2AFXP16104 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC16.07■□□□□ 0.16
H2AFXP16104 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC16.07■□□□□ 0.16
H2AFXP16104 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
H2AFXP16104 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
H2AFXP16104 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
H2AFXP16104 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
H2AFXP16104 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
H2AFXP16104 AC005865.2-203ENST00000636557 2959 ntTSL 5 BASIC16.07■□□□□ 0.16
H2AFXP16104 AL118506.1-201ENST00000601296 3082 ntBASIC16.07■□□□□ 0.16
H2AFXP16104 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
H2AFXP16104 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
H2AFXP16104 TMPRSS12-202ENST00000551456 3336 ntTSL 2 BASIC16.06■□□□□ 0.16
H2AFXP16104 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC16.06■□□□□ 0.16
H2AFXP16104 CICP16-201ENST00000502609 2813 ntBASIC16.06■□□□□ 0.16
H2AFXP16104 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC16.06■□□□□ 0.16
H2AFXP16104 AC040174.1-201ENST00000563003 2571 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
H2AFXP16104 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
H2AFXP16104 PISD-209ENST00000439502 1963 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
H2AFXP16104 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
H2AFXP16104 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC16.06■□□□□ 0.16
H2AFXP16104 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
H2AFXP16104 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
H2AFXP16104 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
H2AFXP16104 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
H2AFXP16104 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
H2AFXP16104 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
H2AFXP16104 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC16.06■□□□□ 0.16
H2AFXP16104 ST20-AS1-201ENST00000560255 4223 ntBASIC16.06■□□□□ 0.16
H2AFXP16104 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC16.06■□□□□ 0.16
H2AFXP16104 MED22-202ENST00000371999 987 ntTSL 3 BASIC16.06■□□□□ 0.16
H2AFXP16104 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC16.06■□□□□ 0.16
H2AFXP16104 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC16.06■□□□□ 0.16
H2AFXP16104 FAM185BP-201ENST00000443595 716 ntBASIC16.06■□□□□ 0.16
H2AFXP16104 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC16.06■□□□□ 0.16
H2AFXP16104 DUX4L26-201ENST00000489078 1255 ntBASIC16.06■□□□□ 0.16
H2AFXP16104 CCDC74BP1-201ENST00000508880 1123 ntBASIC16.06■□□□□ 0.16
H2AFXP16104 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC16.06■□□□□ 0.16
H2AFXP16104 IRF8-202ENST00000562492 946 ntTSL 3 BASIC16.06■□□□□ 0.16
H2AFXP16104 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC16.06■□□□□ 0.16
H2AFXP16104 MTDHP4-201ENST00000600287 670 ntBASIC16.06■□□□□ 0.16
H2AFXP16104 MICAL1-202ENST00000358807 3645 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
H2AFXP16104 RAVER1-206ENST00000611074 3586 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
H2AFXP16104 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
H2AFXP16104 IL1RAPL2-202ENST00000372582 2985 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
H2AFXP16104 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
H2AFXP16104 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC16.06■□□□□ 0.16
H2AFXP16104 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
H2AFXP16104 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
H2AFXP16104 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC16.05■□□□□ 0.16
H2AFXP16104 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC16.05■□□□□ 0.16
H2AFXP16104 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC16.05■□□□□ 0.16
H2AFXP16104 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
H2AFXP16104 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
H2AFXP16104 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
H2AFXP16104 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
H2AFXP16104 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
H2AFXP16104 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC16.05■□□□□ 0.16
H2AFXP16104 AC012508.2-201ENST00000567613 1472 ntBASIC16.05■□□□□ 0.16
H2AFXP16104 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
H2AFXP16104 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
H2AFXP16104 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC16.05■□□□□ 0.16
H2AFXP16104 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
H2AFXP16104 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC16.05■□□□□ 0.16
H2AFXP16104 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC16.05■□□□□ 0.16
H2AFXP16104 PSEN2-202ENST00000366783 2306 ntAPPRIS P3 TSL 5 BASIC16.05■□□□□ 0.16
H2AFXP16104 LDLRAD2-201ENST00000344642 4012 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
H2AFXP16104 ZDHHC8-203ENST00000405930 3112 ntTSL 2 BASIC16.05■□□□□ 0.16
H2AFXP16104 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
H2AFXP16104 KLK8-202ENST00000320838 456 ntTSL 5 BASIC16.05■□□□□ 0.16
H2AFXP16104 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
H2AFXP16104 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
H2AFXP16104 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC16.05■□□□□ 0.16
H2AFXP16104 C11orf21-201ENST00000381153 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
H2AFXP16104 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
H2AFXP16104 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC16.05■□□□□ 0.16
H2AFXP16104 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
H2AFXP16104 MPI-205ENST00000562606 1052 ntTSL 3 BASIC16.05■□□□□ 0.16
H2AFXP16104 OR7E47P-204ENST00000575924 449 ntBASIC16.05■□□□□ 0.16
H2AFXP16104 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC16.05■□□□□ 0.16
H2AFXP16104 UBE2F-223ENST00000612130 2135 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
H2AFXP16104 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC16.05■□□□□ 0.16
H2AFXP16104 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
H2AFXP16104 PCDH8-201ENST00000338862 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
H2AFXP16104 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC16.05■□□□□ 0.16
H2AFXP16104 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
H2AFXP16104 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
H2AFXP16104 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
H2AFXP16104 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
H2AFXP16104 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
H2AFXP16104 FUT8-202ENST00000358307 2664 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
H2AFXP16104 SLC9B1-201ENST00000296422 1879 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 55.6 ms