Protein–RNA interactions for Protein: P11441

UBL4A, Ubiquitin-like protein 4A, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL4AP11441 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
UBL4AP11441 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
UBL4AP11441 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
UBL4AP11441 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
UBL4AP11441 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
UBL4AP11441 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
UBL4AP11441 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
UBL4AP11441 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
UBL4AP11441 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
UBL4AP11441 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC14.41□□□□□ -0.1
UBL4AP11441 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
UBL4AP11441 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
UBL4AP11441 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC14.41□□□□□ -0.1
UBL4AP11441 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
UBL4AP11441 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
UBL4AP11441 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
UBL4AP11441 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
UBL4AP11441 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
UBL4AP11441 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
UBL4AP11441 API5-202ENST00000420461 2009 ntTSL 2 BASIC14.41□□□□□ -0.1
UBL4AP11441 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC14.41□□□□□ -0.1
UBL4AP11441 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
UBL4AP11441 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
UBL4AP11441 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
UBL4AP11441 VMA21-202ENST00000370361 693 ntTSL 5 BASIC14.41□□□□□ -0.1
UBL4AP11441 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
UBL4AP11441 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
UBL4AP11441 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
UBL4AP11441 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
UBL4AP11441 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC14.41□□□□□ -0.1
UBL4AP11441 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC14.41□□□□□ -0.1
UBL4AP11441 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC14.41□□□□□ -0.1
UBL4AP11441 AC241585.1-201ENST00000433527 519 ntBASIC14.41□□□□□ -0.1
UBL4AP11441 USP40-206ENST00000443711 628 ntTSL 2 BASIC14.41□□□□□ -0.1
UBL4AP11441 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC14.41□□□□□ -0.1
UBL4AP11441 AC092183.1-201ENST00000469884 875 ntBASIC14.41□□□□□ -0.1
UBL4AP11441 SDHAP3-202ENST00000515467 728 ntBASIC14.41□□□□□ -0.1
UBL4AP11441 MPI-209ENST00000564003 1195 ntTSL 2 BASIC14.41□□□□□ -0.1
UBL4AP11441 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC14.41□□□□□ -0.1
UBL4AP11441 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
UBL4AP11441 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
UBL4AP11441 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC14.41□□□□□ -0.1
UBL4AP11441 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
UBL4AP11441 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
UBL4AP11441 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
UBL4AP11441 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
UBL4AP11441 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
UBL4AP11441 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
UBL4AP11441 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
UBL4AP11441 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
UBL4AP11441 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
UBL4AP11441 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
UBL4AP11441 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
UBL4AP11441 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
UBL4AP11441 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC14.41□□□□□ -0.1
UBL4AP11441 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
UBL4AP11441 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC14.41□□□□□ -0.1
UBL4AP11441 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
UBL4AP11441 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
UBL4AP11441 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
UBL4AP11441 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
UBL4AP11441 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
UBL4AP11441 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
UBL4AP11441 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
UBL4AP11441 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
UBL4AP11441 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
UBL4AP11441 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
UBL4AP11441 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
UBL4AP11441 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
UBL4AP11441 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC14.4□□□□□ -0.1
UBL4AP11441 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC14.4□□□□□ -0.1
UBL4AP11441 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
UBL4AP11441 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
UBL4AP11441 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC14.4□□□□□ -0.1
UBL4AP11441 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
UBL4AP11441 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC14.4□□□□□ -0.1
UBL4AP11441 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC14.4□□□□□ -0.1
UBL4AP11441 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
UBL4AP11441 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC14.4□□□□□ -0.1
UBL4AP11441 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
UBL4AP11441 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
UBL4AP11441 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC14.4□□□□□ -0.1
UBL4AP11441 AC074338.1-201ENST00000416825 156 ntBASIC14.4□□□□□ -0.1
UBL4AP11441 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC14.4□□□□□ -0.1
UBL4AP11441 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC14.4□□□□□ -0.1
UBL4AP11441 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC14.4□□□□□ -0.1
UBL4AP11441 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
UBL4AP11441 AC093512.1-201ENST00000617969 520 ntBASIC14.4□□□□□ -0.1
UBL4AP11441 AL390754.1-201ENST00000619088 582 ntBASIC14.4□□□□□ -0.1
UBL4AP11441 AL109936.8-201ENST00000641772 604 ntBASIC14.4□□□□□ -0.1
UBL4AP11441 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC14.4□□□□□ -0.1
UBL4AP11441 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC14.4□□□□□ -0.1
UBL4AP11441 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC14.4□□□□□ -0.1
UBL4AP11441 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
UBL4AP11441 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC14.4□□□□□ -0.1
UBL4AP11441 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
UBL4AP11441 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
UBL4AP11441 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC14.4□□□□□ -0.1
UBL4AP11441 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC14.4□□□□□ -0.1
UBL4AP11441 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms