Protein–RNA interactions for Protein: P09603

CSF1, Macrophage colony-stimulating factor 1, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1P09603 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CSF1P09603 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC13.49□□□□□ -0.25
CSF1P09603 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC13.49□□□□□ -0.25
CSF1P09603 SMN2-210ENST00000511812 867 ntTSL 2 BASIC13.49□□□□□ -0.25
CSF1P09603 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC13.49□□□□□ -0.25
CSF1P09603 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC13.49□□□□□ -0.25
CSF1P09603 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC13.49□□□□□ -0.25
CSF1P09603 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC13.49□□□□□ -0.25
CSF1P09603 QPRT-203ENST00000562473 579 ntTSL 3 BASIC13.49□□□□□ -0.25
CSF1P09603 AC106028.4-201ENST00000614509 607 ntBASIC13.49□□□□□ -0.25
CSF1P09603 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC13.49□□□□□ -0.25
CSF1P09603 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
CSF1P09603 CICP14-201ENST00000629111 2732 ntBASIC13.49□□□□□ -0.25
CSF1P09603 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CSF1P09603 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CSF1P09603 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CSF1P09603 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CSF1P09603 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CSF1P09603 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CSF1P09603 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CSF1P09603 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CSF1P09603 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CSF1P09603 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CSF1P09603 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CSF1P09603 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CSF1P09603 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
CSF1P09603 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CSF1P09603 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CSF1P09603 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
CSF1P09603 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC13.49□□□□□ -0.25
CSF1P09603 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CSF1P09603 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
CSF1P09603 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
CSF1P09603 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC13.48□□□□□ -0.25
CSF1P09603 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC13.48□□□□□ -0.25
CSF1P09603 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC13.48□□□□□ -0.25
CSF1P09603 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CSF1P09603 WASH3P-207ENST00000560956 1394 ntBASIC13.48□□□□□ -0.25
CSF1P09603 FO538757.1-201ENST00000623083 1397 ntBASIC13.48□□□□□ -0.25
CSF1P09603 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CSF1P09603 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CSF1P09603 HNRNPH1-201ENST00000329433 2114 ntTSL 2 BASIC13.48□□□□□ -0.25
CSF1P09603 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
CSF1P09603 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
CSF1P09603 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CSF1P09603 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
CSF1P09603 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CSF1P09603 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC13.48□□□□□ -0.25
CSF1P09603 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC13.48□□□□□ -0.25
CSF1P09603 SYS1-203ENST00000414310 795 ntTSL 3 BASIC13.48□□□□□ -0.25
CSF1P09603 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC13.48□□□□□ -0.25
CSF1P09603 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC13.48□□□□□ -0.25
CSF1P09603 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CSF1P09603 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC13.48□□□□□ -0.25
CSF1P09603 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC13.48□□□□□ -0.25
CSF1P09603 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC13.48□□□□□ -0.25
CSF1P09603 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC13.48□□□□□ -0.25
CSF1P09603 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CSF1P09603 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC13.48□□□□□ -0.25
CSF1P09603 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CSF1P09603 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CSF1P09603 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CSF1P09603 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CSF1P09603 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC13.48□□□□□ -0.25
CSF1P09603 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CSF1P09603 ABR-205ENST00000544583 5595 ntTSL 2 BASIC13.48□□□□□ -0.25
CSF1P09603 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
CSF1P09603 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CSF1P09603 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CSF1P09603 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CSF1P09603 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
CSF1P09603 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
CSF1P09603 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC13.48□□□□□ -0.25
CSF1P09603 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CSF1P09603 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC13.48□□□□□ -0.25
CSF1P09603 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CSF1P09603 USP28-214ENST00000545540 3431 ntTSL 2 BASIC13.48□□□□□ -0.25
CSF1P09603 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC13.48□□□□□ -0.25
CSF1P09603 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
CSF1P09603 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CSF1P09603 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CSF1P09603 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC13.47□□□□□ -0.25
CSF1P09603 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CSF1P09603 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
CSF1P09603 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CSF1P09603 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
CSF1P09603 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CSF1P09603 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CSF1P09603 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC13.47□□□□□ -0.25
CSF1P09603 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CSF1P09603 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC13.47□□□□□ -0.25
CSF1P09603 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CSF1P09603 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CSF1P09603 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
CSF1P09603 RAC2-202ENST00000401529 569 ntTSL 4 BASIC13.47□□□□□ -0.25
CSF1P09603 DDT-204ENST00000404092 805 ntTSL 3 BASIC13.47□□□□□ -0.25
CSF1P09603 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC13.47□□□□□ -0.25
CSF1P09603 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CSF1P09603 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC13.47□□□□□ -0.25
CSF1P09603 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC13.47□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms