Protein–RNA interactions for Protein: P02647

APOA1, Apolipoprotein A-I, humanhuman

Predictions only

Length 267 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1P02647 AC023024.2-201ENST00000623561 1993 ntBASIC13.9□□□□□ -0.18
APOA1P02647 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC13.9□□□□□ -0.18
APOA1P02647 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
APOA1P02647 ZIK1-204ENST00000597850 4181 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
APOA1P02647 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
APOA1P02647 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
APOA1P02647 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
APOA1P02647 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
APOA1P02647 AC089987.1-201ENST00000551654 2209 ntBASIC13.9□□□□□ -0.18
APOA1P02647 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
APOA1P02647 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC13.9□□□□□ -0.18
APOA1P02647 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
APOA1P02647 WASH6P-202ENST00000359512 1437 ntBASIC13.9□□□□□ -0.19
APOA1P02647 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
APOA1P02647 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC13.9□□□□□ -0.19
APOA1P02647 AC093668.2-201ENST00000481893 3569 ntTSL 2 BASIC13.89□□□□□ -0.19
APOA1P02647 AC105052.1-201ENST00000519541 3569 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
APOA1P02647 LYN-204ENST00000520220 5808 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
APOA1P02647 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
APOA1P02647 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
APOA1P02647 SNED1-201ENST00000310397 8174 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
APOA1P02647 AC092535.1-201ENST00000417557 2165 ntTSL 2 BASIC13.89□□□□□ -0.19
APOA1P02647 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC13.89□□□□□ -0.19
APOA1P02647 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
APOA1P02647 PEAR1-202ENST00000338302 4970 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
APOA1P02647 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
APOA1P02647 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC13.89□□□□□ -0.19
APOA1P02647 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
APOA1P02647 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
APOA1P02647 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
APOA1P02647 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
APOA1P02647 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
APOA1P02647 SMC4-202ENST00000357388 5471 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
APOA1P02647 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
APOA1P02647 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
APOA1P02647 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
APOA1P02647 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
APOA1P02647 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
APOA1P02647 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
APOA1P02647 AC016734.2-201ENST00000624325 1377 ntBASIC13.89□□□□□ -0.19
APOA1P02647 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC13.89□□□□□ -0.19
APOA1P02647 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
APOA1P02647 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
APOA1P02647 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC13.89□□□□□ -0.19
APOA1P02647 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
APOA1P02647 TAS1R3-201ENST00000339381 3433 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
APOA1P02647 RNF43-208ENST00000584437 5575 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
APOA1P02647 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
APOA1P02647 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
APOA1P02647 PPT1-213ENST00000641319 2388 ntBASIC13.89□□□□□ -0.19
APOA1P02647 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
APOA1P02647 TP53INP1-202ENST00000448464 5631 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
APOA1P02647 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
APOA1P02647 DLGAP1-205ENST00000400150 5332 ntTSL 5 BASIC13.89□□□□□ -0.19
APOA1P02647 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC13.89□□□□□ -0.19
APOA1P02647 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC13.89□□□□□ -0.19
APOA1P02647 NPHP3-ACAD11-201ENST00000471702 7784 ntTSL 2 BASIC13.89□□□□□ -0.19
APOA1P02647 COL6A3-203ENST00000353578 9963 ntTSL 5 BASIC13.89□□□□□ -0.19
APOA1P02647 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
APOA1P02647 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC13.89□□□□□ -0.19
APOA1P02647 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC13.89□□□□□ -0.19
APOA1P02647 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
APOA1P02647 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
APOA1P02647 AJAP1-202ENST00000378191 11666 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
APOA1P02647 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
APOA1P02647 TLL2-201ENST00000357947 6756 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
APOA1P02647 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
APOA1P02647 GNL1-201ENST00000376621 7490 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
APOA1P02647 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
APOA1P02647 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
APOA1P02647 SLC22A12-202ENST00000377567 2599 ntTSL 5 BASIC13.88□□□□□ -0.19
APOA1P02647 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
APOA1P02647 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC13.88□□□□□ -0.19
APOA1P02647 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
APOA1P02647 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
APOA1P02647 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
APOA1P02647 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
APOA1P02647 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
APOA1P02647 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
APOA1P02647 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC13.88□□□□□ -0.19
APOA1P02647 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
APOA1P02647 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
APOA1P02647 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
APOA1P02647 PER3-209ENST00000614998 6261 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
APOA1P02647 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
APOA1P02647 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
APOA1P02647 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC13.88□□□□□ -0.19
APOA1P02647 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
APOA1P02647 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
APOA1P02647 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
APOA1P02647 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC13.88□□□□□ -0.19
APOA1P02647 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
APOA1P02647 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
APOA1P02647 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC13.88□□□□□ -0.19
APOA1P02647 CD99-202ENST00000381180 530 ntTSL 2 BASIC13.88□□□□□ -0.19
APOA1P02647 AC005521.1-201ENST00000393351 872 ntBASIC13.88□□□□□ -0.19
APOA1P02647 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC13.88□□□□□ -0.19
APOA1P02647 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
APOA1P02647 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
APOA1P02647 CIB2-208ENST00000560618 804 ntTSL 2 BASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms